Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0724 ATGGAGAAGCACAAGTGCAAGCTCTGCTTGAGAAACTTCTCTAATGGCAGAGCTTTGGGAGGTCACATGAGGTCTCACATGGTGAATCTTCCTGTTCCTGCTCCGACGTCTTCGTCGTCGTCGTCCTCAGAAGAAGAAGAAGATGACGATAAAGCTCTCTGTTATGGCCTCAGAGAGAACCCTAAAAGAAGCTTTCGCCTTGTGGATCCTGATTTTTCGTTCCCCGTAGAATCCTCCTCTGTAATTCCTCAAGACAGAGAAAGCGAAACTGAATCGTCCAAGAATAATCCAACTCGAACAAGATCCAAAAGGGTATGTAATAATAACAACAACAACCAGTTCCTCCACCACCACCACCACCATCATCAGAAGAAGATGAAACCCAGTGATGATCATCATAAGAATAAGACCGAGTCGTCTTGGGTTGAGCCGGAACCGGCGAGTTCGATTTCTGATGCGACGACTGAGGAAGATGTAGCATTTTGGCTTATGATGTTGTCTAGGGACGAATGGAAGAGACAAGAGGAAAAATACGAAGAGGAAGAAGAAGAAGAAGAAGAGGAAGAAGACGGCCACGAGGACGAAGACGAAGAAGAAGAGAGATCTGTGGAAGATTCTGATGAATTATACGAGGAGATGAAATCATCGAAGACAATATCATCAGTTCGTCGAAGAGTGTTTGCTTCAGGTCAAGCTCTTGGAGGCCACAAGCGAACGCACGTTACTGGTTCTGCAACAACAACTCCGGTTCGAACCCCATCAACCAGGTTCGGATCAGATAACAACAGTTTGATAGATCTTAATCTTCCTGCTCCAGTTGATGAAGATGAGATCAGCCAAATTGAAAATTCTGCAGTTTCAGATGCAGAATTCCTCAAACCCAGTTCGCAAATCTTCCGGGCACAAGTAGCTTAA 915 0.4514 MEKHKCKLCLRNFSNGRALGGHMRSHMVNLPVPAPTSSSSSSSEEEEDDDKALCYGLRENPKRSFRLVDPDFSFPVESSSVIPQDRESETESSKNNPTRTRSKRVCNNNNNNQFLHHHHHHHQKKMKPSDDHHKNKTESSWVEPEPASSISDATTEEDVAFWLMMLSRDEWKRQEEKYEEEEEEEEEEEDGHEDEDEEEERSVEDSDELYEEMKSSKTISSVRRRVFASGQALGGHKRTHVTGSATTTPVRTPSTRFGSDNNSLIDLNLPAPVDEDEISQIENSAVSDAEFLKPSSQIFRAQVA 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0724 304 MobiDBLite consensus disorder prediction 230 264 - -
Lele38g0724 304 MobiDBLite consensus disorder prediction 76 154 - -
Lele38g0724 304 Pfam C2H2-type zinc finger 4 27 - -
Lele38g0724 304 Pfam C2H2-type zinc finger 225 240 - -
Lele38g0724 304 ProSiteProfiles Zinc finger C2H2 type domain profile. 4 31 IPR013087 -
Lele38g0724 304 MobiDBLite consensus disorder prediction 114 129 - -
Lele38g0724 304 MobiDBLite consensus disorder prediction 240 264 - -
Lele38g0724 304 MobiDBLite consensus disorder prediction 173 217 - -
Lele38g0724 304 MobiDBLite consensus disorder prediction 99 113 - -
Lele38g0724 304 PANTHER ZINC FINGER PROTEIN ZAT1-RELATED 224 294 IPR044303 GO:0006355
Lele38g0724 304 ProSitePatterns Zinc finger C2H2 type domain signature. 6 26 IPR013087 -
Lele38g0724 304 Coils Coil 164 198 - -
Lele38g0724 304 MobiDBLite consensus disorder prediction 31 53 - -
Lele38g0724 304 MobiDBLite consensus disorder prediction 176 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0724 Lele-ChrLele38 18270410 18271537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0724 1 281 C2H2 Transcription Factor Family AT3G60580 36.760 1.64e-36 130