Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0703 ATGTTACCCAGATTCGGGTTTCCACTTCTCTTCTTCTTGTTATTTTTCTCTCTTTGTCTCAATGCAGAATCCAAGTGTAAGAAAGGATGTGACTTGGCTCTTGCCTCCTACTACATTTGGGTCGGTCTTCTCGATATCACGTACCTTCCGCAGATCATGAGATCTCCAGTTCTTCAAAGAACTCAAGATATCATCGACTATAACAAAGACCAATTATTAAGCGAAAACTATGTCGAAACCACCGCTCGAGTGAACGTTCCGTTCCCTTGCGATTGCATCGATGGCGAATATCTAGGTTATGTATTCAAGTACCAAATTCAGAAAGGAGATACCTATACGTTGGTTGCGAATAGGAATTATGCCAATTTGACCACCGTTTCGATGTTGGAGAGTGCGAATAGCTATTCGCCGGAGAATCTTCCGGATAATGGAACGCTCAATGTGACGGTGAAATGTTCGTGTGGGGATAGCCACGTTTCGAAAGAGTATGGGTTGTTCGTCACTTACCCACTTAGAGCTGAGGATTCTCTGGATTCCATTGCGAACCAGAGGAAGCTTGATCGATCATTGATTCAGAGGTATAATCCTGGTGTTGATTTCAACAAAGGGAGTGGTGTGGTGTTTATCCCGGGAAAAGGTCTAAATGGTGGGGCTATTGCTGGATTATCTGCTGGAGCAGTAGCTGTGTTTCTCTTATTGGCAACTTGTATGTATGTTGTGTATTACCATAGGAAGAAGGAGGAGGAAAAATTGCTTTCTGGAGATGCTCAAATTGGGAATGATTCCAATGGTCCTCCTGATGGTAATACTGGCGGCAAAGGTATTACTGTGGAGAAGTCAGTGGAGTTCTCATATGACGAACTAGCTCGAGCAACAAGAAACTTCAGTATGGCAAATAAAATTGGTGAAGGTGGTTTTGGGGCTGTCTACTATGCAGAGCTGAGAGGCGAGAAAGCTGCAGTTAAAAAGATGAAGTCACAAGATACGAAAGAGTTTCTTGCTGAATTGAAAGTGTTAACACATGTTCATCACCTGAACCTGGTACGCTTGATTGGATATTGTGTTAAGAGGCATTTTCTTTTCCTTGTATATGAATATATTGATAATGGAAACTTAAGCCAACACCTACGAGATTCAGGGAGAGAACCCCTATCATGGTCAATGCGAGTGCAAATTGCTCTGGAGTCGGCCAGAGGTCTTGAATACATTCATGAGCATACGGTACCTGTATATGTTCATCGTGACATAAAGCCAGCTAATATATTGATAGACAAAAACTTCTGTGCAAAGGTTGCAGATTTTGGGTTAACCAAGCTCATTGAAGTGGGAAATTCACCACATCTCTTTGAAAACATTGCAGGCACATTTGGTTACATTCCACCCAAGAATGATGGTGGTGTTAAAACTGATGTCTATGCTTTCGGAGTTGTTCTCTATGAACTTATATCTGCTAAAGAAGCTGTGCTTATTGACTATGAAGCTGGTTCAGAAGCAAAAACCCTTGTCTCTTTGTTTGAAGAAGCTCTTGAGCAGCCTAATCCTGAAGAACATCTTCTAAAGCTTGTTGATCCTAGGCTTGAAGGCGAATATTCATTCGATTCAGTTTACAAGATGGTCCAACTGGCCAAGGCGTGCTCAGAGGGAAAACCAGACCGACGGCCTAGTATGAGATCTGTTGTGGTGGCTCTAATGACACTCTCTTCTTCTATTGAATAG 1716 0.4231 MLPRFGFPLLFFLLFFSLCLNAESKCKKGCDLALASYYIWVGLLDITYLPQIMRSPVLQRTQDIIDYNKDQLLSENYVETTARVNVPFPCDCIDGEYLGYVFKYQIQKGDTYTLVANRNYANLTTVSMLESANSYSPENLPDNGTLNVTVKCSCGDSHVSKEYGLFVTYPLRAEDSLDSIANQRKLDRSLIQRYNPGVDFNKGSGVVFIPGKGLNGGAIAGLSAGAVAVFLLLATCMYVVYYHRKKEEEKLLSGDAQIGNDSNGPPDGNTGGKGITVEKSVEFSYDELARATRNFSMANKIGEGGFGAVYYAELRGEKAAVKKMKSQDTKEFLAELKVLTHVHHLNLVRLIGYCVKRHFLFLVYEYIDNGNLSQHLRDSGREPLSWSMRVQIALESARGLEYIHEHTVPVYVHRDIKPANILIDKNFCAKVADFGLTKLIEVGNSPHLFENIAGTFGYIPPKNDGGVKTDVYAFGVVLYELISAKEAVLIDYEAGSEAKTLVSLFEEALEQPNPEEHLLKLVDPRLEGEYSFDSVYKMVQLAKACSEGKPDRRPSMRSVVVALMTLSSSIE 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0703 571 Gene3D Transferase(Phosphotransferase) domain 1 367 571 - -
Lele38g0703 571 SMART serkin_6 295 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0703 571 Pfam Protein tyrosine and serine/threonine kinase 297 562 IPR001245 GO:0004672|GO:0006468
Lele38g0703 571 FunFam LysM receptor kinase 2 274 366 - -
Lele38g0703 571 FunFam PTI1-like tyrosine-protein kinase 3 367 571 - -
Lele38g0703 571 ProSitePatterns Serine/Threonine protein kinases active-site signature. 411 423 IPR008271 GO:0004672|GO:0006468
Lele38g0703 571 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 10 570 IPR044812 GO:0019199|GO:0045087
Lele38g0703 571 ProSiteProfiles Protein kinase domain profile. 295 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0703 571 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Lele38g0703 571 Gene3D Phosphorylase Kinase; domain 1 269 366 - -
Lele38g0703 571 SUPERFAMILY Protein kinase-like (PK-like) 277 563 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0703 Lele-ChrLele38 17547521 17556525 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0703 13 569 Receptor kinase-like Gene Family AT3G21630 53.255 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lele38g0703 PK_Tyr_Ser-Thr 2.8e-42 CL0016