Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0696 ATGAGACTATTTTTTGAAGATGCTAATATGCTGCTGTCATATGATACTGATGCATTATTTCTGAAGAAATTGGAGGATTCCCATAGGAAAGCTTTCTTACTTGTAGACCTCGCCTTGGCTAATGAAGCCTCTGTTAATAGTTCCTATGGGACAACAGCATTGACTGCACTTATAATTGGAAATCATTTACTGGTTGCTAATTCTGGCGATTGTAGGGCAGTTCTTTGCAGACGAGGAGTGGCTGTTGACTTGTCTAAAGATCATAGACTGAGTTATTTACCAGAAAAGAGAAGGGTGGAAGAGTTAGGTGGCTTCATTGATGATGGCTATCTCAATGGTTATCTGTCTGTTCCAGCAACACTGCAACACTGA 372 0.4032 MRLFFEDANMLLSYDTDALFLKKLEDSHRKAFLLVDLALANEASVNSSYGTTALTALIIGNHLLVANSGDCRAVLCRRGVAVDLSKDHRLSYLPEKRRVEELGGFIDDGYLNGYLSVPATLQH 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0696 123 Gene3D - 5 121 IPR036457 -
Lele38g0696 123 CDD PP2Cc 29 117 IPR001932 -
Lele38g0696 123 ProSiteProfiles PPM-type phosphatase domain profile. 1 123 IPR001932 -
Lele38g0696 123 PANTHER PROTEIN PHOSPHATASE 2C 26 117 IPR015655 GO:0004722|GO:0006470
Lele38g0696 123 Pfam Protein phosphatase 2C 17 117 IPR001932 -
Lele38g0696 123 SUPERFAMILY PP2C-like 17 117 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0696 Lele-ChrLele38 16953601 16953972 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0696 2 117 PP2C-type Phosphatase Gene Family AT1G48040 67.521 3.15e-50 162