Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0679 ATGAAATCAGAACTTGTTGAGGAGTTAGGGTTGATAGAAAAACAAGTATCTGGATGGTTTTGCCATCGAAGGTTAAAAGATAAAAGGTTGTTGAAAGATGAAGCTTGTGTTAATGGGGATGTTTCAAGTGGTGTCATCCAAGATCATGGAAGTGGACTAGGGCAAGATTCATCTGAAAGCACGAAATACGGTGATTATAGGCATCTTGATCCTAAAGAGATAGAGAATCATGGTCTTTATGGTGGTCATGTTTAG 255 0.3843 MKSELVEELGLIEKQVSGWFCHRRLKDKRLLKDEACVNGDVSSGVIQDHGSGLGQDSSESTKYGDYRHLDPKEIENHGLYGGHV 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0679 84 Gene3D - 1 40 - -
Lele38g0679 84 SUPERFAMILY Homeodomain-like 2 39 IPR009057 -
Lele38g0679 84 Pfam Homeodomain 3 29 IPR001356 GO:0003677
Lele38g0679 84 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 81 - -
Lele38g0679 84 ProSiteProfiles 'Homeobox' domain profile. 1 30 IPR001356 GO:0003677
Lele38g0679 84 CDD homeodomain 1 29 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0679 Lele-ChrLele38 14061388 14063597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0679 1 84 Homeobox Transcription Factor Family AT4G03250 58.140 2.80e-25 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lele38g0679 Homeodomain 6.6e-06 CL0123