Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0660 ATGGCGGCGGTTAATCTTCCTGCTCAGAGTGTAACAAGGTCAACGGCAGCAAATTCCCCGGATAAACGACCCTGTTCGATATTCGAACTCCCGCCTGACTTTTTCCTCTCCTGTCGCCTCCTTGCTTCTCCTCAATCGTCCGTATCCGACAACCCACAGAATTGCAATGACTCAGTCCACGAAACCCTTGACCCTTTTGAGAACGACGCTAATGGCTCCCAAGACGTCGTTGTTTCAATGCCCAGGTGGACTTGCAATACTTGCAAGGCTCAATTTGAGTCCCTTCTAGACCAGCGGTGGCATTTTAAATCGGATATTCATCGGTTCAATGTGAAGTTGACAATGGCTGGAAAGAATATTGTTAAGGAAGAAGATTTTGAGCTGTTGACATCTGATTCTATTAAAGACTATGATGTTTCGAGTATATCAGGATCAGAAGATGATGATGATAACGAAATTGAGACTCATAGACAAAATCAAGTTCGTAACAAATTAAGTGAAAGTTTGAGGCAAAAGTTATTTGTCCGCCTAATGACAGGGGAGAGAGTTTCTGTTTGGAAGTGCTTAATAATGAACATGGGTGAGAATGTACTGAATGAGAACGAAGTGGTCGAGAGGTTGAAGTCTTTGACTCTCGGGCCCAGGAATAATTCTTGCTTGAGAATTGTGCTTCTTGCATCTGGAGGGCACTTTGCAGGTTGTGTGTTTGATGGTGATGAGCTTGTGGCTCACAAGACATTCCACAGATATGTTGTTAGGGCCAAGGCAGGGAAAAAACAGTCATCAAAAGATGCTACTGGAAGGGCTGCACATTCTGCAGGGGCTTCACTCCGTCGCCACAACGAACTTGCATTAAAGAAGGAAATTCAAGAGCTGCTTACTGGTTGGAGAAATTATTTGGATGCTTCAAATTGCATATTCCTACATGCTCCTTCAAGTAGTCGTCAACTGCTCTTTGATGGAGAGAGGCCTTATTTTAGCAATGAGCATAATGTTATTAGAAATATTCCATTGACTGTTCGAAGGCCTACTTTAAGTGAGGCAAAGCGTGTATATAACCAGTTGACTCAAGTATCCTATGAAGCAGATGAGGATCTAGAGTCAACTCCCAGTACTGTAAGAAATGCCAACCCAGCCATTGACAAAGAGGCCTTTGCTAACTTAGATAGCAAGGATAAAAGTGAGGCTTGTTCTAGCAAACAAGCTAATTATGAACTCCTTATTTCAAGTGCCAGTGAGAGTGAAAATGGGATAGTAGGTAAATCAACACCTTTACATCAAGCAGCTCAATCTGGTGACTCTCACAAGGTTTTGGAGCTACTGGAGCAGGGCATGGATCCTTGCATCAAAGATGAAAGAGGAAGGACCCCTTATATGTTGGCACATGATAAGGAAGTAAGGAATACTTTCAGAAGGTTAATGGCATCAAACCTTGAAAAATGGGATTGGCATGTGGCAAAAGTTCCTAGTGCATTGACCAAGGAAATGGAAGAATCACAAGCAGCTAAGCAGGCTGAAAAAGATGCCAAGAGAAAAGCCAGAGCAAAAGAATTAAAAAAATTACGTAAAGCAAAAGAAAAAAAGGCTCAGGCTGAAGCTGCTAAGAATGCTTCCAAAACTGCAGAAAACCCAGTGAATGCTTCAACTTCTATTTATAAAGGACAATCCCAACCCAACGGTGGGTTGAAATTATCTGAAGAGGAGCAACTAAGAAGAGCTCAGGCTGAAGAAAGAGAGAAGAGAGCAGCTGCTGCAGAGAGAAGACTTGCTGCCCTCAAGATTCAAGGCGGCGGTGCGACCAATGTCCCAAGCACTTCAGAACCAAAAATTGGAGCAGCCGGTGACATATATTGTTCCTGTTGTAATACCTCACTTGCTGGTAAAGTTCCATTCCATAGGTATAATTATAAATACTGCAGCATTTCATGCATGCATGTACACAGGGAGATTTTAGAGGATGAATGA 1965 0.4275 MAAVNLPAQSVTRSTAANSPDKRPCSIFELPPDFFLSCRLLASPQSSVSDNPQNCNDSVHETLDPFENDANGSQDVVVSMPRWTCNTCKAQFESLLDQRWHFKSDIHRFNVKLTMAGKNIVKEEDFELLTSDSIKDYDVSSISGSEDDDDNEIETHRQNQVRNKLSESLRQKLFVRLMTGERVSVWKCLIMNMGENVLNENEVVERLKSLTLGPRNNSCLRIVLLASGGHFAGCVFDGDELVAHKTFHRYVVRAKAGKKQSSKDATGRAAHSAGASLRRHNELALKKEIQELLTGWRNYLDASNCIFLHAPSSSRQLLFDGERPYFSNEHNVIRNIPLTVRRPTLSEAKRVYNQLTQVSYEADEDLESTPSTVRNANPAIDKEAFANLDSKDKSEACSSKQANYELLISSASESENGIVGKSTPLHQAAQSGDSHKVLELLEQGMDPCIKDERGRTPYMLAHDKEVRNTFRRLMASNLEKWDWHVAKVPSALTKEMEESQAAKQAEKDAKRKARAKELKKLRKAKEKKAQAEAAKNASKTAENPVNASTSIYKGQSQPNGGLKLSEEEQLRRAQAEEREKRAAAAERRLAALKIQGGGATNVPSTSEPKIGAAGDIYCSCCNTSLAGKVPFHRYNYKYCSISCMHVHREILEDE 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0660 654 MobiDBLite consensus disorder prediction 494 569 - -
Lele38g0660 654 MobiDBLite consensus disorder prediction 536 563 - -
Lele38g0660 654 MobiDBLite consensus disorder prediction 499 513 - -
Lele38g0660 654 MobiDBLite consensus disorder prediction 1 22 - -
Lele38g0660 654 MobiDBLite consensus disorder prediction 140 159 - -
Lele38g0660 654 Gene3D - 380 487 IPR036770 -
Lele38g0660 654 ProSiteProfiles Ankyrin repeat region circular profile. 420 452 - -
Lele38g0660 654 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 18 653 - -
Lele38g0660 654 Pfam Bacteroidetes VLRF1 release factor 222 360 IPR041175 -
Lele38g0660 654 ProSiteProfiles Ankyrin repeat profile. 420 452 IPR002110 GO:0005515
Lele38g0660 654 Pfam Vms1-associating treble clef domain 617 649 IPR041540 -
Lele38g0660 654 Coils Coil 566 595 - -
Lele38g0660 654 Coils Coil 496 541 - -
Lele38g0660 654 SUPERFAMILY Ankyrin repeat 419 475 IPR036770 -
Lele38g0660 654 MobiDBLite consensus disorder prediction 7 21 - -
Lele38g0660 654 SUPERFAMILY beta-beta-alpha zinc fingers 63 116 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0660 Lele-ChrLele38 7935379 7967348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0660 17 601 C2H2 Transcription Factor Family AT1G01930 53.821 0.0 572