Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0652 ATGGCGTCGCCGACCAACGCGGCCATCGTCACTGTCGTTGCCCTCTTCATCTCCGCCACCGCAGCTGCATCCGTGTACACCAACCATACTGTCGGCGACGCCAATGGCTGGTTCTTCAACGCCACCGCCAACACTTCCGCTGCTAACTACTCTGCTTGGGCTACTACGCAAACCTTCAACCTAGGCGACTATCTCGTCTTCAACACAAATTCCAACCAGACCGTGATTCAGACTTACAACTTAACCACTTACCGGAATTGCACCGCAGACGAATCCGACAATGGAACCTTCGTGTACAACGGCGGCGTTTCTCGTTTCGGCGAGGCGTTGGCCATCGCTGTTGCATTAACCATAGAAGGTCCCAACTACTACTTCTCCGACGCAGGCGACGGCGTCCAGTGCCAACACGGGATGGCCTTCGAAATCAATGTCAAGCACGGCCTCGGCTTGCCTCCGAGTCTCAACCAGCCGCCGCCTCCGCCGTATATTGAACCTCCAGGTCCCGATACGGCAGATTCTCCGCCGATTACGGTGGCGCAGTCTCCAAACAACGCGCTCACTGCCCGAGCTAACGTGCGCCAGGTGCCTTATGGTCTTTGCGTTCGATTCCTTTGA 615 0.5659 MASPTNAAIVTVVALFISATAAASVYTNHTVGDANGWFFNATANTSAANYSAWATTQTFNLGDYLVFNTNSNQTVIQTYNLTTYRNCTADESDNGTFVYNGGVSRFGEALAIAVALTIEGPNYYFSDAGDGVQCQHGMAFEINVKHGLGLPPSLNQPPPPPYIEPPGPDTADSPPITVAQSPNNALTARANVRQVPYGLCVRFL 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0652 204 ProSiteProfiles Phytocyanin domain profile. 27 146 IPR003245 GO:0009055
Lele38g0652 204 SUPERFAMILY Cupredoxins 27 144 IPR008972 -
Lele38g0652 204 MobiDBLite consensus disorder prediction 150 175 - -
Lele38g0652 204 FunFam Early nodulin-like protein 18 26 147 - -
Lele38g0652 204 PANTHER BLUE COPPER PROTEIN 25 161 IPR039391 GO:0009055
Lele38g0652 204 Gene3D - 25 146 IPR008972 -
Lele38g0652 204 MobiDBLite consensus disorder prediction 152 172 - -
Lele38g0652 204 Pfam Plastocyanin-like domain 42 138 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0652 Lele-ChrLele38 6477196 6478131 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0652 3 168 Phytocyanin Superfamily AT1G08500 38.012 1.22e-33 118