Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0637 ATGGCTGCTCTTCAGAAACACACTGTCGAATTCCCAGATCCACGAAGCGTTGATCTCAGGCTTCACAGTGATTGCCATGCCGCCGGAGAAGAAGAACCCACGACGGCTCTGATAAACGGACCTAAAGAAGAGCCGGCTTCGGAGGAGGGCTCTCCGGAGGCGATGCAGGTTATGCCGATGGCGGTGCACGTGCCGCGTAAGAAGGCTTCGACGAAGGACCGTCACACGAAGGTCGAGGGGAGAGGCCGGAGGATCCGAATGCCCGCCACGGCCGCCGCTCGGATCTTCCAGTTGACCCGGGAATTGGGTCACAAGTCCGAGGGTGAAACAATCCGGTGGCTTCTAGAACATGCGGAGCCCGCCATCATGGCGGCCACTGGCACCGGTACGGTCCCCGCCATAGCCATGTCCGTTAACGGAACCCTCAAAATCCCAACTATCCCATCCATCAGCAACAAGCCCGAACCCGATGACCCACCCGAAAGAAAGAAACAAAAGCGATCAACAAACAGTTCGCACGCAGACCTAAACGATGGCGTTTCGGTTTCCGTCGGCCTTGCACCTATATCAATAACGGCGACAGCGACGACAAAGCCAAGCAATCCAACGGTTAATCCCCAACAAGCCGCAATACCGTTAGCTCAAGGATTGGTGCCCAGGTGGGCGATACCATCAAACGTCGTCGTTCCGGCGGGTACGTGCTTCTTAGTCCCACCGATGGGTTCCATCGCCGGAAATTCAACAAACCAGCCACAGTTTTTCGCCATCCCCGTGAATGCAACGCCTCTGATCAACATTCCAGCAAGAGCTATATCGGCTTTCGTCTCATTAATGGAGAAGAACATCGCAGCGCCTGTTCACTTCCAAGCAGCGACAACAATACCGCCGTGTTCAACTGCCCCGTCCGTGAAACCACCGAAAGAAGCGACGATTCCGGCACCGAGCTCAAACTCTGGTGCTACCACCCCAAGCACAACCCAGACGCTGAGAAAATTCTCGTTAGATATTTACGATGAGGAGGAGCTTCAACTCAAGTCTGGCAGTTCAAAGCAGTGA 1056 0.5511 MAALQKHTVEFPDPRSVDLRLHSDCHAAGEEEPTTALINGPKEEPASEEGSPEAMQVMPMAVHVPRKKASTKDRHTKVEGRGRRIRMPATAAARIFQLTRELGHKSEGETIRWLLEHAEPAIMAATGTGTVPAIAMSVNGTLKIPTIPSISNKPEPDDPPERKKQKRSTNSSHADLNDGVSVSVGLAPISITATATTKPSNPTVNPQQAAIPLAQGLVPRWAIPSNVVVPAGTCFLVPPMGSIAGNSTNQPQFFAIPVNATPLINIPARAISAFVSLMEKNIAAPVHFQAATTIPPCSTAPSVKPPKEATIPAPSSNSGATTPSTTQTLRKFSLDIYDEEELQLKSGSSKQ 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0637 351 ProSiteProfiles TCP domain profile. 71 125 IPR017887 -
Lele38g0637 351 MobiDBLite consensus disorder prediction 311 328 - -
Lele38g0637 351 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 56 223 IPR005333 GO:0003700
Lele38g0637 351 MobiDBLite consensus disorder prediction 25 52 - -
Lele38g0637 351 MobiDBLite consensus disorder prediction 299 328 - -
Lele38g0637 351 MobiDBLite consensus disorder prediction 155 171 - -
Lele38g0637 351 Pfam TCP family transcription factor 70 169 IPR017887 -
Lele38g0637 351 MobiDBLite consensus disorder prediction 145 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0637 Lele-ChrLele38 5817402 5818457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0637 65 254 TCP Transcription Factor Family AT2G45680 62.304 4.18e-68 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele38g0637 TCP 7.1e-28 No_clan