Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0630 ATGCCTACAATCTCTGCTATGACAAAAACTGTTTCCACCACAATCTTCACTAGCTTCTATCATCATTCAAGCTCTCAATTTAGCCCTAACAGCAGTTCTTCGCCTTTGAATGGTGAAGCAAATGAAGTACAAGAGCAGTGCAAGGGGAAGAATAATAATATTGAGAGCATTGTGTTGCCTAAAATATCTATTTTCTACGGTTTGAGAACCGTTTCTACCATAATATTTAGTAACTCTAATGCTGGCACCATCTCTTGTAACTCCTCCCATGCTCATGGTGCAATCTCTGTTTATCAACCTCATGCTAACAGTTCTTCACCTTTGAATGTTAAAGCAAGTGAATTACAAGAGCAGTGGAAAGGGAAGAATAATAATATTGAGAGTATTATGTTATCTAAAACATCTATTTTCTACAGTTTGAGAACCGTTTCTACTATAATATTTAGTAGCTCTGATTCTGGCACCATCTCTTCTAACTCCTCCTATGCTCATGGTGCAATATCTCTTCATCAATCTCATGCTAACAGTTCTTCACCTTTGAATGCTGAAGCAAGTGAATTACAAGAGCAGTGGAAAGGGAAGAATAATAATATTGGGAGTATTGTGTTGCCTGGAACCTCTATTTTCTACTGCCTGAGAACCGTTTCTACCATAATATTTAGTACTTCGGATTCTGGCACCAACTCTTCTGGCTCCTCCCATGCTCATAAAGAAATCTCTCATCATCAACCTAATGCTAATAGCCCTGCACCTTTAAATGTTCAAGCAACTGATGAAGTAAAAGAGTACACTGTCCTCAGTAACCAGCCCAAGTGGAAGAGAGGAAAACTTCTAGGGCAAGGAGGATTTGGGCGTGTTTATAAAGGATTTAACAGTGAAACTGGACAAATATGCGCAATTAAAGAAGTTCTCGTTGACGCTGATGATGAGAGATCAGAAAAATGCCTTCAACAACTTTTTCAATTTGGAAAACGGGATGTCATATATTCTTTGGGGGGAACTTTTATAAATTTGAAAAAACTCTACAAAGAAAGCTTTGTTGCTGAGACATCTCTGCAATATTCGTATTCGCGGAATGATATGAATCTCTCCTATCTTAATAGCTTCTCTGAGCGTCTCTTTGCTCCTCTCTACTCTACAACTCCCATCAGGAGCCACAAGACGGATGACTTTGCTATTGAGGGTCGTAACCTGAATTTCTCGTTCCCGTCAAGGCAGGTGAAAGCTGTACCAATTCTTCGGGATTGTTCAATTCGCATCCCTTCTGGGCAGTTTTGGATGCTTCTTGGACCCAATGGATGTGGGAAATCTACCCCCTTAAAGATATTAGCTGGTCTCTTGAATCCTACTTCAGGAACTGTGTACGTGAAGGGGCCCAAAAGTTTTGTTTTCCAAAATCCAGATCATCAGGTGGTAATGCCTACAGTGGAAGCTGATGTGGCATTTGGTCTTGGCAAGTTCAATCTGACCCGTGATGAAGTGAGATCAAGGGTATCAAGAGCCTTGCAAGCTGTGGGCATGTCTGACTACATGCAGAGATCTGTTCAAACTCTAAGTGGTGGTCAGAAGCAGAGGGTTGCCATTGCTGGTGCTTTAGCAGAAGCTTGTAAAGTTCTGTTGTTGGATGAGCTCACAACCTTCTTAGATGAAAGTGACCAGCTGATGCATTCCTTCCATGAAAGCCGTCGCCTGTGCACACCTTGTTACTGTAGCACCATGGATTCCCAATTTCCTTTTTCCTCTGATGCTACAAGTTACGCCGCGAGTGATATTGTCCTTCGAGTTCTTCCTCTGTCATTGTTCTGTGCAGTAGCCGTGGTGACAGTGGAAAAGAAACAGAAATCTTCGTTTGGTTTTTGGTGTCTGCTGTTTGGCTCTGTCTTTTCCGTTTTTTTCCCTTGCTGCTGCCGAATAGCCATCGTGTGTGGTGTGGTTGGTGTTATCAAAGCAGTTAGGAACTCTCTGGATACCTCAGCAGGGGTTACTGCATTGTGGGTGACCCATCGTTTAGATGAATTGAATTATGCTGATAGTGCTGTGTACATGGAGGATGGGAAAGTTGTGATGGTTGGAGATGCAGAAAGAATAAAAAGTTTCATTGAAGCCAGGCAATCCGACTATATCAAACAGATAAATTCTTGA 2142 0.4174 MPTISAMTKTVSTTIFTSFYHHSSSQFSPNSSSSPLNGEANEVQEQCKGKNNNIESIVLPKISIFYGLRTVSTIIFSNSNAGTISCNSSHAHGAISVYQPHANSSSPLNVKASELQEQWKGKNNNIESIMLSKTSIFYSLRTVSTIIFSSSDSGTISSNSSYAHGAISLHQSHANSSSPLNAEASELQEQWKGKNNNIGSIVLPGTSIFYCLRTVSTIIFSTSDSGTNSSGSSHAHKEISHHQPNANSPAPLNVQATDEVKEYTVLSNQPKWKRGKLLGQGGFGRVYKGFNSETGQICAIKEVLVDADDERSEKCLQQLFQFGKRDVIYSLGGTFINLKKLYKESFVAETSLQYSYSRNDMNLSYLNSFSERLFAPLYSTTPIRSHKTDDFAIEGRNLNFSFPSRQVKAVPILRDCSIRIPSGQFWMLLGPNGCGKSTPLKILAGLLNPTSGTVYVKGPKSFVFQNPDHQVVMPTVEADVAFGLGKFNLTRDEVRSRVSRALQAVGMSDYMQRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDESDQLMHSFHESRRLCTPCYCSTMDSQFPFSSDATSYAASDIVLRVLPLSLFCAVAVVTVEKKQKSSFGFWCLLFGSVFSVFFPCCCRIAIVCGVVGVIKAVRNSLDTSAGVTALWVTHRLDELNYADSAVYMEDGKVVMVGDAERIKSFIEARQSDYIKQINS 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0630 713 Gene3D - 388 565 IPR027417 -
Lele38g0630 713 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 645 698 - -
Lele38g0630 713 Pfam ABC transporter 413 545 IPR003439 GO:0005524
Lele38g0630 713 SMART AAA_5 422 598 IPR003593 -
Lele38g0630 713 Gene3D Phosphorylase Kinase; domain 1 255 347 - -
Lele38g0630 713 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 393 709 IPR003439 GO:0005524
Lele38g0630 713 ProSitePatterns ABC transporters family signature. 518 532 IPR017871 GO:0005524|GO:0016887
Lele38g0630 713 SUPERFAMILY Protein kinase-like (PK-like) 263 310 IPR011009 -
Lele38g0630 713 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 651 699 IPR027417 -
Lele38g0630 713 CDD ABC_cobalt_CbiO_domain1 394 563 IPR015856 GO:0005524|GO:0016020|GO:0055085
Lele38g0630 713 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 392 553 IPR027417 -
Lele38g0630 713 MobiDBLite consensus disorder prediction 226 252 - -
Lele38g0630 713 Gene3D - 645 712 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0630 Lele-ChrLele38 5645044 5657153 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0630 393 556 Calmodulin-binding Proteins AT2G36910 31.522 5.18e-14 74.3