Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0626 ATGGTGGAACAACGTGGAGAAGTTGATGATAAATATTCCATTGAAGACTGGTTCTTTCGAGCTCAAGAACTCGTACCGATTGCAATTAACAAGGCGAAAGAAGAGGTGAAGGGATTTTCTGGTAGATGGAAAGTGATTGTTTCAAAGATAGAACAAATCCCATCATGCTTATCAGACTTATCTAGCCATCCTTGTTTCTCCAAGAATGCTCTTTGTAAGGAGCAATTGCAGGCTGTGTCGAAGACACTAGAGGAAGCCATCGATTTAGCCGAGTTATGCGCGAAAGAGAGGTACGAAGGTAAGCTTCGAATGCAGAGTGATCTCGACGCTTTGTCCGGGAAATTCGATTTGAATTTACGAGATTGTAGACTATTGATCAAGACTGGTGTTCTTGGTGAGTCTACTTTTCCATTGGGTTTGTCCGATGATGCGAAACAAGGGAACGATGTAAGAGAATTGTTCGCTCGCCTTCAGATTGGTGACTTGGAGGCGAAGCATAAAGCTATAGACAGTGTTATTGAAGCAATGAAGGAAGAAGAAAAGAGTGTTATGTCTGTTATAGGAAGAAGCCAAATTGCGTCTTTAGTTCAATTGTTAATGGCTACTTGTAATAGGATAAGGGAAAAAGCAGTTACTGTCATATGCTTTCTTGCAGAATCCGGGAAGAACTCCGAGAATTGGCTTGTTTCTGAAGGAGTTTTACCGCCTCTGATTTGGCTTCTCGAATCCGGTGGGGCTATTGGGAAAGAGAAGGCTGCAATGTGTCTTCAGAGGTTGTCCATGTCGGAGGAATCTGCCCGAGAAATCGTCGGACACGGCGGTGTTAAGCCACTGATTGAGCTATGTCATAATGGTGATTCTTTGTCCCAATCTACTGCTGCTTGTTCCTTGAAGAACATATCTTCAGTTCCTGAATTGAGACAATCTTTGTCTCAAGAAGGCATTATGAAGACTATGATCAATCTCCTTGATCATGGGATTCTGCTAGAATCCAAGGAATCTGCTTCAGAATGTTTACAGAACCTCACATCAAGCAATGAGAATCTAAGAAAGTCTGTTATATCAGAAGGTGGTGTCAGGAGTCTTCTTGCTTATCTTGATTCTCCAATTCCTCAAGAATCAGCTGTCACGGCGTTGAGGAATCTAGTCGGATCAATCAGCGAGCGGGATTTGATCTCATTAGGCCTCCTTCCTCGTTTGATCCACGTGCTAAACTCGGGATCTTCCGGAGCTCAGCAGGCGGCGGTCTCAACAATATGTCGAGTTTTGATCTCATCAGATATGAAGAAAATGGTGGTTGAGGCCGGATTCATTCCACTGCTAATCAAAATGCTGGAATCTAAATCGAATAGCGCGAGGGAATTCGCGGCGCAAGCCATCGCTAGCTTGATGACGGTTACGCAAAACCGCAGGGAGGCGAGGATGAATGACAAGAGTGTGCCGAATCTGGTTCAGTTGCTTGATCCAAGTCCACATAATACTGCAAAGAAATATGCAATTTCTTGTTTATGTTCACTTTCTTCAAGCAGGAAAAGTAAGAAGCTGATGATTGCTTATGGGGCAATTGGATATCTAAAGAAGCTTAAAGAGATGGACATTCCAGGAGCTAAAATGCTACTTGATAGATTGGAAAGAGGGAAATTCAGAAGCTTATTCAGCAGAAAATGA 1668 0.4305 MVEQRGEVDDKYSIEDWFFRAQELVPIAINKAKEEVKGFSGRWKVIVSKIEQIPSCLSDLSSHPCFSKNALCKEQLQAVSKTLEEAIDLAELCAKERYEGKLRMQSDLDALSGKFDLNLRDCRLLIKTGVLGESTFPLGLSDDAKQGNDVRELFARLQIGDLEAKHKAIDSVIEAMKEEEKSVMSVIGRSQIASLVQLLMATCNRIREKAVTVICFLAESGKNSENWLVSEGVLPPLIWLLESGGAIGKEKAAMCLQRLSMSEESAREIVGHGGVKPLIELCHNGDSLSQSTAACSLKNISSVPELRQSLSQEGIMKTMINLLDHGILLESKESASECLQNLTSSNENLRKSVISEGGVRSLLAYLDSPIPQESAVTALRNLVGSISERDLISLGLLPRLIHVLNSGSSGAQQAAVSTICRVLISSDMKKMVVEAGFIPLLIKMLESKSNSAREFAAQAIASLMTVTQNRREARMNDKSVPNLVQLLDPSPHNTAKKYAISCLCSLSSSRKSKKLMIAYGAIGYLKKLKEMDIPGAKMLLDRLERGKFRSLFSRK 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0626 555 Gene3D - 147 538 IPR011989 -
Lele38g0626 555 Coils Coil 159 179 - -
Lele38g0626 555 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 11 553 - -
Lele38g0626 555 Pfam Armadillo/beta-catenin-like repeat 265 302 IPR000225 GO:0005515
Lele38g0626 555 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 314 358 IPR000225 GO:0005515
Lele38g0626 555 SUPERFAMILY ARM repeat 149 514 IPR016024 -
Lele38g0626 555 SMART arm_5 345 384 IPR000225 GO:0005515
Lele38g0626 555 SMART arm_5 425 465 IPR000225 GO:0005515
Lele38g0626 555 SMART arm_5 303 344 IPR000225 GO:0005515
Lele38g0626 555 SMART arm_5 467 508 IPR000225 GO:0005515
Lele38g0626 555 SMART arm_5 385 424 IPR000225 GO:0005515
Lele38g0626 555 SMART arm_5 262 302 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0626 Lele-ChrLele38 5567304 5568971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0626 400 539 U-box Gene Family AT2G23140 33.333 3.13e-09 57.8