Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0613 ATGGAACTGCAGGCGCACATTTCAGGTCAGGTACCTAATAAAGCAGGGTCTCAGTTGCCTGGGCTGGCTCCAAATGGAAATGCCCTCCCTCCTCAGATACCAAATTTAGGGGGTGTTCCACGTTCAACCATAAATATGGACCCTGAATTTCACCGAGCACGTTTGCATATGCAGGAGAAGATCTATGATGCGCTCTTGCAGCGGCAGCAGCATCCGGTTTCAGAACTTCATAGAAGAAAGTGTAGGGATTTTGCCAAACGCCTGGAGGAGGGCATGTTAAGATCTGCACCCTCTAAGGAGGAGCACTTGAACATGGAAACATTAGAGAGCCGTTTGGTGAATTGCATCAAGCGATCATCTACGAGTAATCATAACCAACAATATACAAGTAATCATAACCAACAATATCCCCAGATTGTCAGCTCTTCGCCAGTAGGTACAATGATACCAACACCTGGCATGTCGCATGTTGTGAATTCAAGCATGGCCTCTACATCTTCTGTAGAGGCCTCAATGATTGCATCCAGTGGATGTAATAGCATAGCATCTTCATCTATCAATAGTGGAAACATGTATCTACCTGGCAGCTTGCATGGGAATTCCTTAAGTAGATCTGATGGTATGGCAAATGGCTATCAGCAGCCTTCTACCGGCTTTTCCATTGGTTCCGGGGGAAACATGTCATCAATCGGTGTGCAGAGAATTGCAAGTCAGATGATTCCCTCTCCTGGATTCACTGGCAGCTATCACTCATACATGAATATAGAATCTTCTAATAATAGCAGTGGCTTCTCCAATGTTGATTCCACTATGGTATCACAGTCACCGCAGCAGCAGCATGTTGGTGGCCGAAACAATAATGTGATGAAGAACCTTGGCAGCCAAATGGGTAGTGGAATGAGGCCAGGTTTACAACAAAAACCTTTTGCATACTCAAATGGAGCTATAAGTAGTGGATTAGGCTCAATTGGAAATAATATGCAAGCTGCAGATGAATCTGGAATTACTGATGGCTATGCCACAACTTATGGTAACTCCCCTAAACAACTGCAGCAGCACTTTGATCAAAATCAGCAACCACCGGTGCAGGGTGATGGTTATGGATTGAATAATGTCGACTCTTTTGCTCCTGGAAACTTTTATTCATCTGCAACATCTTGTGGATCTATCATGAGCAGTCAGAACATGAATTCAACAAAATTGCCTGCTATATCCAAAACCAACTCTCTGATTAGTAGTCATTCGAGTTTGCATGGTACACAGCAGGCTGCTCTTTTGAAGTCTCAAGCAATTAATCAGTTGGAGAACTTGAATTTTCAGTCTTCTTTGACTTCAAGAGATGACCTTTTGCATCATCAACAGCAACAGCCTCAACAATTTCAACAGCCAGAACAATATGCGCAGCAGCAATTTCAACGCCAGCAGCCTCAGCATTTGGTCAATAATGATGCTTTTAGTCAGTCTCAGGCAGCATCCAATTTAGAAAGCCGAGTGAAGTCTGAGCCTGGAGTCGAACATCATCAAGAAGTGCTTAATTCACAGGTTTCTGGACAGATTCATATTTCTGGGATGCAAAATCAGTTTCGGCAGAAATCTGCTGAAGATTGCTCTAAGAATGCTCAACATCTTTCTTTTCCACCTGGTCAGAATGATTTATCCATGAGAGCACCTCAGAATTCGCAACAAATGCTACACCCTCGACATTTGACTTCACAGCCTGGAAATAATTTTAGCTGGCCTTCAGTTGGGACACAGTCTAAACCTGCACATGCAAATCAATGGAATTCTCGGTCACAAGATGTCAACCACATAACAGGGAATACATCACAAGAGCAGCTTGTCCGGTCTGATTTCCATCAACGGATATCAAGGCAAGATGAAGCTCAATGCAATAATTTATCATCAGATCCATCTATTGTTGGGCAAGCTGTTGCTTCTAAAGGCTCATCTGAGCCACAAGACTTAGGTGTTGCTATAAAACAAGCACACAGGAACCAACAGAGGTGGCTTCTATTTCTGCTTCATGCCCGACGATGTCCTGCCCCTGAAGGACAATGCCAAGAAAAATATTGTTATAGTGCTCAGAAGTTATGTAGACACATAGAAGGATGTGATCTAACTCATTGTCCATATCCCCGCTGTCATCATACCAGGCTGTTGCTTCGTCATTTCAGAAGCTGCAAGGATCCTTGTTGTCCTGTTTGTGTCTTTGTTCGCAATTATCGATGTTCATTTAAACTTAAGTCTCATATTCAGCCAGCTAATGATTCAGGCATGCGAGTTGCTGTTAATGGATCCTGCAATTCCTATGATACCGAAGTTCCATCACCTAGCTTGATCCCAAAGCCAGTACCTGTGATTGAAAATTCAGAAGACCTGCAGCCATCTCAAAAACGTATGAAGATTGAGCAGAGTACCCATTCCTTAAGTTCCAAGAATGACAACTCTGCTATATCATTTTCTGCGAACTGTTGTTCTGATGTTTCCAAGGGTGCTCAGTGCCAAGATCTTCCCCATTGTGAGACATCTATTTTAATTAAATCTGAGCTTATAGAGGTCAAGAAAGAAGTTCTGGTACATTCAGCAAACGAGAATCTTAGTGAAGTTAATGTAAGTAACATGGAAGGCGGAGGGCCTACTAGTGAACCTGTCACATTTAATGATTCCGGGCCAGAAAATATTAATACAGAGAAAGCAAGGGGACAAGATAAACCACTAAGTGTGACCCTTCCATCTGAAAATGCATCGGGTACCAAATCAGGTAAGCCCAAAATAAAGGGGGTCTCATTGATTGAACTATTCACTCCAGAGCAAGTCAGGGAACATATCACTGGTCTTAGGCAATGGATTGGCCAGAGCAAAGCAAAAGCAGAGAAGAATCAAGCAATGGAGCATTCAATGAGTGAGAATTCCTGTCAGTTGTGTGCTGTAGAGAAGCTTACTTTTGAACCACCTCCAATTTATTGCTCAACTTGTGGTGCTCGCATCAAACGAAATGCTATGTATTATACTATGGGTGCTGGTGACACACGACATTATTTTTGTATTGCATGCTATAATGAGGCTCGTGGAGACAGCATTGTTGTTGATGGAATGACCATTCCTAAGGGGAGGCTGGAGAAGAAGAAAAATGATGAAGAAACTGAGGAATGGTGGGTTCAATGTGATAAATGTGAAGCTTGGCAACACCAAATTTGTGCTTTATTTAATGGTCGAAGAAATGATGGGGGGCAAGCTGAATACACTTGCCCTAACTGCTATATTCAAGAGGTCGAAAGAGGAGAGCGCATACCGTTACCTCAAAGTGCTGTTCTTGGGGCCAAGGATCTGCCTAGAACGATTCTGAGTGACCACATAGAGCAACGGTTGTTTAGGAGACTAAAACAAGAGAGACAGGAGAGGGCAAGGATTCAAGGAAAAAGTTATGACGAGGTGCCTGGGGCTGAGTCACTTGTTATAAGAGTTGTGTCATCTGTAGACAAGAAGTTAGAAGTGAAACAGCGTTTTCTGGAAATTTTTCAGGAAGAAAATTACCCAACAGAATTCCCTTACAAATCAAAGGTAGTTTTGTTATTTCAGAAGACTGAAGGTGTGGAAGTGTGTCTGTTTGGCATGTATGTGCAAGAATTTGGATCTGAATGCCAATTTCCGAATCAGCGACGAGTATATCTTTCATATCTTGATTCTGTGAAGTATTTTCGGCCTGAGGTTAAAGCAGTGACTGGAGAGGCTCTTCGGACATTTGTTTACCATGAAATTCTAATCGGATACCTTGAATATTGCAAGAAACGTGGTTTTACAAGCTGTTATATCTGGGCATGCCCTCCATTGAAGGGTGAAGATTATATATTGTATTGTCACCCCGAAATTCAAAAAACGCCAAAATCGGATAAACTTCGAGAATGGTACCTTTCAATGTTAAGAAAAGCTGCCAAGGATGATATTGTGGTCGATCTCACAAACTTGTATGACCATTTTTTTGTATCTACTGGTGAATGTAGAGCAAAGGTTACCGCTGCAAGACTTCCATATTTTGATGGAGACTACTGGCCAGGGGCTGCAGAGGATTTGATTTATCAGCTCCGTCAAGAAGAAGATGGCAGAAAGCAGAATAAGAAAGGAACTATGAAGAAAACTATAACGAAAAGGGCTTTAAAGGCATCTGGTCAGACAGATCTTTCTGGAAATGCCTCAAAGGATCTACTCCTAATGCATAAACTTGGAGAAACCATTAGCCCGATGAAGGAAGATTTTATCATGGTTCATTTGCAGCATGCATGCAGCCACTGTTGCATTTTAATGGTGTCTGGCAACCGTTGGGTTTGTAACCAATGCAAGAATTTTCAGATTTGTGACAAGTGTTATGAAGCAGAACAAAAACGTGAAGAAAGAGAAAGGCATCCTATAAATCAGAGGGAGAAACATTCTCTTAACCGAATTGAAATTACTGAGGTACCAGCTGATACAAAGGACAGAGATGAGATTCTTGAGAGTGAATTTTTTGACACTAGACAGGCATTTCTGAGTCTCTGCCAGGGAAACCATTATCAATATGATACTCTAAGGCGGGCCAAGCATTCGTCGATGATGGTCCTATATCACCTTCATAATCCAACTGCTCCTGCCTTTGTGACAACCTGTAATATATGCTATCTTGACATAGAAACTGGTCAAGGTTGGCGATGTGAAGTTTGCCCTGAGTATGATGTGTGCAATTCTTGTTATCAAAATGGAGGCATTGATCATCCACATAAGTTGACAAATCATCCATCATTGGCTGATCGTGATGCCCAAAACAAAGAAGCGAGACAGCTTCGAGTGTTGCAGCTACGGAAAATGCTTGATCTTCTTGTGCACGCATCTCAATGTCGTTCTCCACATTGCCAGTATCCCAATTGTCGAAAAGTGAAGGGGCTTTTCCGCCATGGAATTCAATGTAAAACACGTGCATCTGGGGGTTGTGTTCTTTGCAAGAAAATGTGGTATTTGCTTCAACTTCACGCTCGAGCTTGCAAAGAATCCCAGTGCCATGTACCACGATGCAGAGATTTAAGAGAACATCTAAGGAGGTTACAGCAGCAGTCTGACTCTCGGCGAAGAGCAGCTGTAATGGAGATGATGAGACAGAGAGCAGCAGAAGTTGCCAACAATGCAGGATGA 5160 0.4252 MELQAHISGQVPNKAGSQLPGLAPNGNALPPQIPNLGGVPRSTINMDPEFHRARLHMQEKIYDALLQRQQHPVSELHRRKCRDFAKRLEEGMLRSAPSKEEHLNMETLESRLVNCIKRSSTSNHNQQYTSNHNQQYPQIVSSSPVGTMIPTPGMSHVVNSSMASTSSVEASMIASSGCNSIASSSINSGNMYLPGSLHGNSLSRSDGMANGYQQPSTGFSIGSGGNMSSIGVQRIASQMIPSPGFTGSYHSYMNIESSNNSSGFSNVDSTMVSQSPQQQHVGGRNNNVMKNLGSQMGSGMRPGLQQKPFAYSNGAISSGLGSIGNNMQAADESGITDGYATTYGNSPKQLQQHFDQNQQPPVQGDGYGLNNVDSFAPGNFYSSATSCGSIMSSQNMNSTKLPAISKTNSLISSHSSLHGTQQAALLKSQAINQLENLNFQSSLTSRDDLLHHQQQQPQQFQQPEQYAQQQFQRQQPQHLVNNDAFSQSQAASNLESRVKSEPGVEHHQEVLNSQVSGQIHISGMQNQFRQKSAEDCSKNAQHLSFPPGQNDLSMRAPQNSQQMLHPRHLTSQPGNNFSWPSVGTQSKPAHANQWNSRSQDVNHITGNTSQEQLVRSDFHQRISRQDEAQCNNLSSDPSIVGQAVASKGSSEPQDLGVAIKQAHRNQQRWLLFLLHARRCPAPEGQCQEKYCYSAQKLCRHIEGCDLTHCPYPRCHHTRLLLRHFRSCKDPCCPVCVFVRNYRCSFKLKSHIQPANDSGMRVAVNGSCNSYDTEVPSPSLIPKPVPVIENSEDLQPSQKRMKIEQSTHSLSSKNDNSAISFSANCCSDVSKGAQCQDLPHCETSILIKSELIEVKKEVLVHSANENLSEVNVSNMEGGGPTSEPVTFNDSGPENINTEKARGQDKPLSVTLPSENASGTKSGKPKIKGVSLIELFTPEQVREHITGLRQWIGQSKAKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCSTCGARIKRNAMYYTMGAGDTRHYFCIACYNEARGDSIVVDGMTIPKGRLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIQEVERGERIPLPQSAVLGAKDLPRTILSDHIEQRLFRRLKQERQERARIQGKSYDEVPGAESLVIRVVSSVDKKLEVKQRFLEIFQEENYPTEFPYKSKVVLLFQKTEGVEVCLFGMYVQEFGSECQFPNQRRVYLSYLDSVKYFRPEVKAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLRKAAKDDIVVDLTNLYDHFFVSTGECRAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTMKKTITKRALKASGQTDLSGNASKDLLLMHKLGETISPMKEDFIMVHLQHACSHCCILMVSGNRWVCNQCKNFQICDKCYEAEQKREERERHPINQREKHSLNRIEITEVPADTKDRDEILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICYLDIETGQGWRCEVCPEYDVCNSCYQNGGIDHPHKLTNHPSLADRDAQNKEARQLRVLQLRKMLDLLVHASQCRSPHCQYPNCRKVKGLFRHGIQCKTRASGGCVLCKKMWYLLQLHARACKESQCHVPRCRDLREHLRRLQQQSDSRRRAAVMEMMRQRAAEVANNAG 1719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0613 1719 MobiDBLite consensus disorder prediction 869 922 - -
Lele38g0613 1719 ProSitePatterns Zinc finger PHD-type signature. 1015 1086 IPR019786 -
Lele38g0613 1719 Gene3D - 1541 1591 IPR043145 -
Lele38g0613 1719 ProSitePatterns Zinc finger ZZ-type signature. 1547 1574 IPR000433 GO:0008270
Lele38g0613 1719 ProSiteProfiles Zinc finger ZZ-type profile. 1422 1485 IPR000433 GO:0008270
Lele38g0613 1719 SUPERFAMILY FYVE/PHD zinc finger 1048 1088 IPR011011 -
Lele38g0613 1719 Gene3D TAZ domain 657 742 IPR035898 -
Lele38g0613 1719 SMART KAT11_2 1137 1434 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lele38g0613 1719 FunFam Histone acetyltransferase of the CBP family 12 1418 1477 - -
Lele38g0613 1719 Pfam Histone acetylation protein 1144 1367 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lele38g0613 1719 SUPERFAMILY RING/U-box 1402 1471 - -
Lele38g0613 1719 MobiDBLite consensus disorder prediction 338 370 - -
Lele38g0613 1719 MobiDBLite consensus disorder prediction 338 365 - -
Lele38g0613 1719 CDD PHD_HAC_like 1014 1086 - -
Lele38g0613 1719 SMART PHD_3 1014 1087 IPR001965 -
Lele38g0613 1719 Pfam TAZ zinc finger 1611 1681 IPR000197 -
Lele38g0613 1719 Pfam TAZ zinc finger 667 735 IPR000197 -
Lele38g0613 1719 SUPERFAMILY RING/U-box 1523 1589 - -
Lele38g0613 1719 Pfam PHD-finger 1045 1087 IPR019787 -
Lele38g0613 1719 SMART zz_5 1541 1586 IPR000433 GO:0008270
Lele38g0613 1719 SMART zz_5 1421 1465 IPR000433 GO:0008270
Lele38g0613 1719 MobiDBLite consensus disorder prediction 1 27 - -
Lele38g0613 1719 SUPERFAMILY TAZ domain 663 741 IPR035898 -
Lele38g0613 1719 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1104 1540 IPR031162 GO:0004402
Lele38g0613 1719 SMART TAZ_2 1604 1682 IPR000197 -
Lele38g0613 1719 SMART TAZ_2 661 738 IPR000197 -
Lele38g0613 1719 ProSiteProfiles Zinc finger TAZ-type profile. 657 738 IPR000197 -
Lele38g0613 1719 Gene3D - 1418 1477 IPR043145 -
Lele38g0613 1719 ProSiteProfiles Zinc finger PHD-type profile. 1012 1089 IPR019787 -
Lele38g0613 1719 SUPERFAMILY TAZ domain 1603 1685 IPR035898 -
Lele38g0613 1719 MobiDBLite consensus disorder prediction 449 476 - -
Lele38g0613 1719 FunFam Histone acetyltransferase HAC1 1541 1591 - -
Lele38g0613 1719 ProSiteProfiles Zinc finger ZZ-type profile. 1542 1594 IPR000433 GO:0008270
Lele38g0613 1719 ProSiteProfiles Zinc finger TAZ-type profile. 1601 1684 IPR000197 -
Lele38g0613 1719 Gene3D - 982 1042 IPR038547 -
Lele38g0613 1719 PANTHER CBP/P300-RELATED 442 1710 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lele38g0613 1719 FunFam Histone acetyltransferase HAC1-like protein 1598 1715 - -
Lele38g0613 1719 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1043 1087 IPR013083 -
Lele38g0613 1719 MobiDBLite consensus disorder prediction 869 919 - -
Lele38g0613 1719 Pfam Zinc finger, ZZ type 1544 1585 IPR000433 GO:0008270
Lele38g0613 1719 Gene3D TAZ domain 1598 1715 IPR035898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0613 Lele-ChrLele38 5241858 5254168 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Lele38g0613 HAT_KAT11 4.5e-32 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0613 38 5241858 5254168 Lele38g0613 38 5241858 5254168 ECH
Lele38g0613 38 5241858 5254168 Lele39g0771 39 16278154 16288680 hybridization
Lele38g0613 38 5241858 5254168 Lele40g0578 40 5035354 5047572 hybridization