Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0605 ATGCAGGTTCGCCCAGCCGAATTGGAACATATACTTCACACTCACCCCGAAATTGCTGATGCTGCCGTAGTTAGCAAGGTAGGGCAAATTCCAATGGCGTTTGTGGTAAGAAAGCCTGGAAGCAATATCAACGCAGATGAGGTTATGGATTTTGAGGCAAAGCAGGTGCTGTCAACGTCAAGTTCTGGAAATTACCAATATGACAAACACAGTGATACATCAAAAGCCAACAGTGAGAAATATGTCTAA 249 0.4378 MQVRPAELEHILHTHPEIADAAVVSKVGQIPMAFVVRKPGSNINADEVMDFEAKQVLSTSSSGNYQYDKHSDTSKANSEKYV 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0605 82 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 2 58 - -
Lele38g0605 82 MobiDBLite consensus disorder prediction 60 82 - -
Lele38g0605 82 Pfam AMP-binding enzyme C-terminal domain 7 50 IPR025110 -
Lele38g0605 82 Gene3D - 1 70 IPR045851 -
Lele38g0605 82 SUPERFAMILY Acetyl-CoA synthetase-like 2 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0605 Lele-ChrLele38 5118475 5119367 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0605 2 56 Monolignol Biosynthesis Gene Families AT5G63380 59.322 2.99e-18 75.5