Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0601 ATGGGCGCGCACGCCGCCTTGCCTGTGCGCGTTCCGGCAGCAACTTCTGATCTTCTTGTCGTTCTTCTGCCTTTTCTTCTTCTTCTTCTCTCGTGGTCGTCTCCTTCGTTGTCCTACTCTGATGCCGAAGCCCTCTTGAAGTTTAGAAGCTCCCTCAACGATGTTGTCGGTCTCAGGAATTGGGATCCCTCTGTCAACCCTAAGCCGCCATGCACAGGCAATATTCCAAATTGGGTCGGCATTTTCTGCATCAACGACTCCGTTTGGGGCTTCCGTCTCGAGAATATGGGCCTCATGGGCAACATTGACGTCGATGCTCTTGCTTCCATGCCCCGTTTAAGGTCTATTAGCTTGATGAATAATTCCTTCGGCGGACCTTTGCCTGAAATCAAGCGCGTGAAGAATTTGAAGTCCATTTACTTATCGTACAACCATTTCTCCGACAACATCCCCGACGATGCATTTGTAGGTATGAATATGTTAAAGAAAGTTTATTTGGCAAATAACCAGCTCACCGGAAAAATCCCTTCCTCCCTCGGCGTCTTGCCTAATCTCCTCGCCGTCCGGCTTGACGGCAACAAGTTTCATGGCCGAATCCCTAATTTTCAAAACAGCACGTTGAAGCTTATCGATTTGTCTAACAATAATTTAGAGGGCCCCATTCCACAGAATCTTACCTCTTTCAACGCCTTCGCCTTCTCAGGGAACGCACGTTTATGTGGACCTCCTCTGCGGAATCCATGCCCCATCCCTTACGCTACCATGGATTCTCAATCAAAGGCAGCGATTCTAAGGATCCTGTTTATTTTACTTCTCACACTACTGATCATAGTGATAATTGTTTCGGCGATCGTGATAGCCCGCCTGAGAACTCGCCGGCGATACGGCGACGACTCGGTCTCGACTTTCCAAAGCCAACCTTCTTTGAAGTACGCTGCTCCGGCGTTCACCAAAGCGAAAAGCATAGTCGATCACCATGAAAGAACAAAGATTCTTGCTGAACAAAACAATAGTTATCAGCATACGCCGTCGACGAAGAAAGGCGAAGCCGGGAAGTTGATATTTGTGAGGAATCTTGAGAAGAAGTTTGATTTGCAGGATTTGTTGAAGGCATCGGCGGAGATTCTGGGGAGTGCTGCGTTTGGATCTTCATATAAAGCTGTGATGAAGGAAGATCAAGCGGTGGTGGTGAAGAGGTACAAGCAGATGAACAATGTTTCGAAAGATGAGTTCTTTGAACACATGGCAAGGCTTGGTGATCTCTCTCATCCGAATCTTCTTCCTCTCGTTGCTTATTATTATAGAAAAGAAGAAAAACTCTTGCTCTCTGACTTCGTTCAAAAGGGTTGTTTGGCCAGCCATCTTCATGGTAATCATAGCGAGGAGCAGCCATGCTTAAACTGGCCAACTCGTTTGAAAATTGTAAAAGGCGTAGCAAGGGGTTTATCATACCTATACACTGCATTACCAAGCTTAGTGGTTCCTCATGGTCATTTGAAATCTTCAAACATTCTCTTAGACGAATCATACGAGCCCTTACTCACAGATTATGCTCTCATTCATGTCATTAATCTGGATCATGCTCAACAGATCATGATGCCCTACAAGTCGCCGGAGTATGCGCAACTCGGCCGGATAACAAAGAAGACCGATGTATGGAGCTTCGGCATTGTTATTCTCGAGATCTTAACGGGGAAGTTCCCGGAGAACTATCTGACTCAGAGGCACGAACCTGGTTCGGACATAGCCAGTTGGGTGAATAGTATGATCACGGAGAAGCGTACGAGTGAAGTGTTTGATGTTGAAATGGGAGCGATTGAGAATAGTAAGAGTGAATTGCTTAAGCTTTTGAAGATTGGACTGAGTTGTTGTGAGGAGAATGTGGAGAGAAGATTGGATATGAAAGAAGCTCTTGATAAGATTGAAGAGTTGAAGGATGAGAATGTTGGAGAGTTTTCTTTGTCTGTCACTGGTGAACGCTATGCTTTTCAAGCTATATAA 2001 0.4578 MGAHAALPVRVPAATSDLLVVLLPFLLLLLSWSSPSLSYSDAEALLKFRSSLNDVVGLRNWDPSVNPKPPCTGNIPNWVGIFCINDSVWGFRLENMGLMGNIDVDALASMPRLRSISLMNNSFGGPLPEIKRVKNLKSIYLSYNHFSDNIPDDAFVGMNMLKKVYLANNQLTGKIPSSLGVLPNLLAVRLDGNKFHGRIPNFQNSTLKLIDLSNNNLEGPIPQNLTSFNAFAFSGNARLCGPPLRNPCPIPYATMDSQSKAAILRILFILLLTLLIIVIIVSAIVIARLRTRRRYGDDSVSTFQSQPSLKYAAPAFTKAKSIVDHHERTKILAEQNNSYQHTPSTKKGEAGKLIFVRNLEKKFDLQDLLKASAEILGSAAFGSSYKAVMKEDQAVVVKRYKQMNNVSKDEFFEHMARLGDLSHPNLLPLVAYYYRKEEKLLLSDFVQKGCLASHLHGNHSEEQPCLNWPTRLKIVKGVARGLSYLYTALPSLVVPHGHLKSSNILLDESYEPLLTDYALIHVINLDHAQQIMMPYKSPEYAQLGRITKKTDVWSFGIVILEILTGKFPENYLTQRHEPGSDIASWVNSMITEKRTSEVFDVEMGAIENSKSELLKLLKIGLSCCEENVERRLDMKEALDKIEELKDENVGEFSLSVTGERYAFQAI 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0601 666 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 26 648 - -
Lele38g0601 666 SUPERFAMILY Protein kinase-like (PK-like) 374 644 IPR011009 -
Lele38g0601 666 SUPERFAMILY L domain-like 68 244 - -
Lele38g0601 666 FunFam pollen receptor-like kinase 1 339 445 - -
Lele38g0601 666 Coils Coil 627 647 - -
Lele38g0601 666 FunFam Pollen receptor-like kinase 1 446 654 - -
Lele38g0601 666 Pfam Leucine rich repeat N-terminal domain 40 83 IPR013210 -
Lele38g0601 666 ProSiteProfiles Protein kinase domain profile. 370 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0601 666 Gene3D Ribonuclease Inhibitor 40 156 IPR032675 -
Lele38g0601 666 Pfam Protein tyrosine and serine/threonine kinase 374 639 IPR001245 GO:0004672|GO:0006468
Lele38g0601 666 Gene3D Phosphorylase Kinase; domain 1 335 445 - -
Lele38g0601 666 Pfam Leucine rich repeat 135 195 IPR001611 GO:0005515
Lele38g0601 666 Gene3D Ribonuclease Inhibitor 157 249 IPR032675 -
Lele38g0601 666 Gene3D Transferase(Phosphotransferase) domain 1 446 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0601 Lele-ChrLele38 5083162 5086207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0601 13 646 Receptor kinase-like Gene Family AT5G35390 48.762 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele38g0601 PK_Tyr_Ser-Thr 4.4e-30 CL0016