Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0595 ATGCAGGCATTGGAATCCTTCTATGAGCAATTTGATCCAGATTTCATAAACATTAGAACAAAGGCTCGTGAAGTGCTGCAGAGAGACGATGACCTCAATGAAATTGTCCAGCTTGTAGGCAAGGAAGCTTTAGCTGAAGGAGACAATATCACATTAGAAACTGCAAAGCTTTTGAGAGAGGATTATCTTGCTCAGAATGCTTTTACTCCATATGACAAATTCTGCCCCTTCTATAAATCTGTTTGGATGATGCGCAACATTATCCATTTCTACAATTTGGCAAATCAGGCAGTGGAGCGGGGAGCTGGTACAGATGGTCAAAAGATAACTTACTCCCTCATCAAGCATCATTTGGGTGATCTCTTCTACTGTCTAGTGTTGCAGAAATTTGAGGATCCAGCAGAAGGCGAAGCAGCTCTGGTTGACAAATTTAAGAAGCTTCATGAGGACCTGACCAATGGTTTCCGTAATCTTGAGGATGAACCCGGTAGATTGTACAATTTTAGATTGCAAATGTTAGGGGTTCTTTGA 531 0.4143 MQALESFYEQFDPDFINIRTKAREVLQRDDDLNEIVQLVGKEALAEGDNITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGTDGQKITYSLIKHHLGDLFYCLVLQKFEDPAEGEAALVDKFKKLHEDLTNGFRNLEDEPGRLYNFRLQMLGVL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0595 176 Coils Coil 141 161 - -
Lele38g0595 176 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 11 94 - -
Lele38g0595 176 Gene3D - 1 157 IPR024034 -
Lele38g0595 176 CDD ATP-synt_V_A-type_alpha_C 15 121 - -
Lele38g0595 176 FunFam V-type proton ATPase catalytic subunit A 1 152 - -
Lele38g0595 176 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 1 161 IPR022878 GO:0046034|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0595 Lele-ChrLele38 5008146 5009678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0595 3 161 Primary Pumps ATPases(2) AT1G78900 88.679 5.25e-98 294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0595 38 5008146 5009678 Lele38g0595 38 5008146 5009678 ECH
Lele38g0595 38 5008146 5009678 Lele39g0796 39 17007468 17014138 hybridization
Lele38g0595 38 5008146 5009678 Lele40g0564 40 4796899 4799179 hybridization