Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0584 ATGAAGTCAAGGATTTGTGAGTTGTGTAGTGAGCAGGCGTACCTGTATTGTGGTTCTGATTCTGCGTTTTTGTGTTGGAAATGTGATGGTAAGGTTCATGATGCCAATTTCTTAGTTGGTCGTCATATTCGAGAGATTCTCTGCTGCAATTGTATGTGTTTCGCCGGAAAGCAGATCTCTGGTAGTGTGGCTACGTTTGAAACCGTAACCTGTAAGTCTTGTTCGCCGGAGAATCCCTCCGATGAGGATGATTGTTTGTCTTCATCATCCATGTCGGCTTGCGTTTCAAGCACCGAGTCCTGTGCGACAGGTCCGAAGAAGATTCCGCGTCGGACGGAGACGGTGGTGTCGTCAGGTTCTGTCACGGATGAGAAGAAGTGCCCGGCGGAAGGGAAGAAGAATCCAGTACGGTGTCCAGCGGAGGAGGTTTTCACGAACTGGAGCAGAAAGTTAGGGGTAAATGGAAATTGCGTGGCGGCGTTGGCGTCGCCGGCGCTGGGTAAGCTAATGGCGGTGGTTCCGTTCAGAGTGGCGGTGGCGACGGCGTTTTGGTTCGGGCTGAGATATCGCGGTGACGGGCAGTTACGCACGGCTCAGAATTTGAGAAAGTTAGAGGAAATGTCTAAAGTGCCAGGCAAGGTGATCGTGGCGGCCGAGCAAAAGCTGACACGTGCCCTAAGACCCAAAAGAGCGAGGCGCCAATTCGAAGAAGGATGGGACGAGTGCTAA 729 0.5213 MKSRICELCSEQAYLYCGSDSAFLCWKCDGKVHDANFLVGRHIREILCCNCMCFAGKQISGSVATFETVTCKSCSPENPSDEDDCLSSSSMSACVSSTESCATGPKKIPRRTETVVSSGSVTDEKKCPAEGKKNPVRCPAEEVFTNWSRKLGVNGNCVAALASPALGKLMAVVPFRVAVATAFWFGLRYRGDGQLRTAQNLRKLEEMSKVPGKVIVAAEQKLTRALRPKRARRQFEEGWDEC 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0584 242 ProSiteProfiles Zinc finger B-box type profile. 1 46 IPR000315 GO:0008270
Lele38g0584 242 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 5 98 - -
Lele38g0584 242 CDD Bbox1_BBX-like 5 44 - -
Lele38g0584 242 SMART bboxneu5 1 47 IPR000315 GO:0008270
Lele38g0584 242 Pfam B-box zinc finger 2 34 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0584 Lele-ChrLele38 4907224 4907952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0584 5 241 C2C2-CO-like Transcription Factor Family AT3G21150 32.530 3.80e-28 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele38g0584 zf-B_box 7.4e-06 No_clan