Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0572 ATGCTTATGAAATTGGCCCTGACAAAAAATACATATACAACGGCAAATACAAAAGAATCTGATGTCTACAGTTATGGGATAGTTTTGCTTCAGTTGATAACTCGTAAGAAGGAGGTGGATCGTCATTCATTTCTGGAGGGAATTGAGGCAGGGAACTTGTGGGTGAGAACTTTTTTAAGGGAAATAGGAGTCATTAGTACAATTGTCGATGCGAACCTTACAGAGGAAGTTGTGAATCCACTTGTACTTGACCAAGTTGCCAAAGTGCTTGTGCTGGCTCTAAGTTGCACAGAGAGGGATCCAGACGTGAGACCCACAATGAGGGACGTTATCAAGCAATTAGAAGATCCATACAAGGAAACAAATGCTGGTGCAGACTTGCTGGCTCCACATGGGTTCTTCTATCCGTAG 411 0.4282 MLMKLALTKNTYTTANTKESDVYSYGIVLLQLITRKKEVDRHSFLEGIEAGNLWVRTFLREIGVISTIVDANLTEEVVNPLVLDQVAKVLVLALSCTERDPDVRPTMRDVIKQLEDPYKETNAGADLLAPHGFFYP 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0572 136 ProSiteProfiles Protein kinase domain profile. 1 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0572 136 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 17 115 - -
Lele38g0572 136 SUPERFAMILY Protein kinase-like (PK-like) 15 114 IPR011009 -
Lele38g0572 136 Gene3D Transferase(Phosphotransferase) domain 1 5 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0572 Lele-ChrLele38 4827125 4827535 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0572 9 116 Receptor kinase-like Gene Family AT1G73080 46.903 8.68e-26 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele38g0572 None None None