Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0571 ATGATCAGAGAAATTGAAATGACTAGGAAGATTAGGCATCAAAATGCGGCAAGATGCCTAGGCTCCTGGATAGGTGAGGAATATGGTCTAACCATTAGCAGGTACATGGAAAATGGAAGCCTTCATGATGTTTTGCATGGAAACGATCCACTACCATACTTTGCATGTAATGTCCGCAATAAAATTGCTATTGGAATTGCAAAAGGACTGGCATATCTCCATAATGACTGTGATCCTCCCATATTGCATAGAGACATCAAACCAAAGAATATACTCCTTGATTCTGATATGCAACCTCGTATTATTGATTTTGGTATTTCCATTGCTTTGAATCAATCCTCTGATAGGGTGCAGATTGCATATGTGATAGAGCCGAGCAGTGAGCTTGATGTATATAGTTATGGGTTAGTTTTGCTTGAGCTGATAACCGGAAAGAAAGTATTAGATTCCTTTTTTGTGAAGGAGGAAACCACTTTAGTAGGTTGGTTTAAATTTGTATGGAGGAGAACAAGAGAACTTGAAGAGATTGTTGATTCAAGCATTGCAATGGAGCTTTCAGATATGAACGTAATGGTGCAAGTTATCAAAGTGCTTTTGGTGGCTTTAATATGCTCTCAAAAAGACCCAAGAAAGAGACGGAAAATGTTAGATGTTGTTGAATTCTTCGAAACAGCCACGAATTCAGGTAAGATTTGTGTGATAGACAATGACAAATGTTACTATCATCCATGA 732 0.3798 MIREIEMTRKIRHQNAARCLGSWIGEEYGLTISRYMENGSLHDVLHGNDPLPYFACNVRNKIAIGIAKGLAYLHNDCDPPILHRDIKPKNILLDSDMQPRIIDFGISIALNQSSDRVQIAYVIEPSSELDVYSYGLVLLELITGKKVLDSFFVKEETTLVGWFKFVWRRTRELEEIVDSSIAMELSDMNVMVQVIKVLLVALICSQKDPRKRRKMLDVVEFFETATNSGKICVIDNDKCYYHP 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0571 243 SMART serkin_6 1 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0571 243 SUPERFAMILY Protein kinase-like (PK-like) 2 222 IPR011009 -
Lele38g0571 243 ProSitePatterns Serine/Threonine protein kinases active-site signature. 81 93 IPR008271 GO:0004672|GO:0006468
Lele38g0571 243 Pfam Protein kinase domain 2 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0571 243 PANTHER OS01G0253100 PROTEIN 3 224 IPR045271 -
Lele38g0571 243 Gene3D Transferase(Phosphotransferase) domain 1 1 229 - -
Lele38g0571 243 ProSiteProfiles Protein kinase domain profile. 1 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0571 Lele-ChrLele38 4819522 4820561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0571 1 220 Receptor kinase-like Gene Family AT1G17750 44.726 5.92e-52 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele38g0571 Pkinase 3e-26 CL0016