Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0569 ATGGTCAGCGTCGTTGACGTGCATCTCCAAATAAAAGACGGGAAAACGAAGTGCGTCAATCTTAGCAACGTTTCCACTCTGAAACTTCCTCCTCGGAACTGTACAACATCTCTTGAATTGTTTGCATTTGTTCTAAGCCATTGGACTTCTGTGCCTCCTTCCTTAAATTCAAGCTGGAATTCCTCTGATTCCAGCCCTTGCTTATGGACAGGAATACAATGCGACAAGTATGGCAAGGTGATCTCCCTAAACCTCACTGCTTACAGTATTTTTGGTCACCTCGGACCAGAAATTGGGCAGTTGACTCATTTGCGGAACCTTGTGTTGGTTGCAAATGGTTTCTCAGGAACAATGCCTCTAGAATTGGGAAACTGTAGTCTGCTCGAGTATATGGACCTTTCTGATAACTACTTCAGTGGAAGCTTACCATATACATTGAAAACGTTGCAGAAGTTGAAGTATGTACGTTTTTCTTCTAATCTGCTCGCTGGTGGAATTCCTGAGTCATTGTTTCACATTCCTAAACTACAGGGGATTGATCTTCACAATAACGATCTAAGTGGTCCCATCCCATTCGATATTGGGAACACCACTGAATTGTTGAAATTGCATCTATCTGGCAATCAGTTGTCAGGAACCATTCCCTCTTCCATAGGTAACTGCAGTAAACTAGAGGCATTATTTGTGAATGATAACATATTGACAGGAATTTTGCCTCAGAGTCTGAACAATCTGAAGAATCTTGTTTATTTAGATGTCAAAAACAATACCCTTGGTGGTACCATCCCTCTTGGCTCTGGAAGTTGTGACAAGTTATTTATTTTGGATCTGTCATTCAATGTATTTAGTGGAGGCATTCCCTCAAGCTTGGGGAATTGTAGCAATTTAGTAGAACTTGCTGCCATGAAGAGCAGCTTAGCTGGAAGCATTCCATCATCCCTAGGATTATTACTAAAGATTTCAATTCTTCGCCTTCCTGAGAACCATTTGTCTGGAAATATACCTCCAGAAATTGGCAACTGCAAATCTTTGAAGAAGTTACATCTATACTCCAATCAACTGGGCGGAACAATTCCAAATGAATTGGGAGGCTTGAGTAAACTGGAGGACCTTGAACTGTACTCCAACCATTTGACAGGTGAAATTCCATTTACCATTTGGAAGATTCAAAATCTTAAGCATGCCCTTCTTCACAATAATAGCCTTTCAGGGAAATTACCTTCAGAGATGACAGAGCTCAAGCATCTGAAAAATATCTCATTGTTTGACAACCAGTTCTTTGGATTAATCCCTCAAAACTTGGGAATCAATAGCAGTTTAGTGAAGTTGGAGTTGATGAATAATAAGTTTACCGGTGACATCCCTCCAAATCTTTGTTTTGGAAAGCAACTTCGCACACTGAGTTTAGGTCTCAATCAACTTCAAGGGGGCATACCTCAAGATTTGGGTAGATGTGCAACTCTTGGGAGGTTGGTTCTCAATGAAAATAATCTTTCTGGGTCTCTTCCTGAATTTGAAGGTAATCACAATCTCATATACATGGACATGAGCAAGAACAACATCAGTGGAGTAATTCCATCAAGTTTGGGAAACTGCACTAGTCTCACAGCACTAATTTTGTCCATGAATAACATAAGAGGGATTATACCCTTGGAGTTAGGAAATCTTGTGAACCTTCAAGCTCTGAATCTTGCTCACAACAACCTAGAAGAAGTCAATATATCATACAACTCATTTGTTGGTCCTTTACCAGAATGGAAAACGCAACGTCTGAATTTATCTTCATCATCAGTCATGGGCAATCCTGGTCTTTGGGTCCTTTGTTCAACCTCAAATGGCTCCAGTTGCACAACTAACCACAACGGCAGTAGACATTCAATTTTATTTATAGCACTTGGATTTGTAGGGTTTGTCATCTGTCTGTCAGAAATACTACTGATTTATGACCATCATTCTAGACACAGATCTAATGAGGGGGTCCTTACTTATCCTAATGAGCAAATTTACATACACCAAATGGGTCAAAGACCTGAACTTAAGGCCAATTTTGCTGATTACAAACTTCAGGAGGCTTCATATTCAAACGATGAAGGAGATTTCAGAATTATTAATTTAATGAATGTTATGGAGAATTTTCATGATCGATATATCATTGGTGAAGGAGGGCATGGAATTGTTTATAAGGCCAAACTTGATATTGGAGTTTTTGCCATTAAGAAGGTTAACTTTGGACAAAGCAATAGGAGGAAAGTAAACATGATCAGAGAAATTGAAATGACTAGGAAGATTAGGCATCAAAATGCGGCAAGATGCCTAGGCTCCTGGATGGGTGAGGAATATGGTCTAACCATTAGCAGGTACATGGAAAATGGAAGCCTTCATGATGTTTTACACGAAAACGATCCACTACCATACTTAGCATGGAATGTCCGCTATAAAATTGCTATTGGAATTGCAAAAGGACTGGCATATCTCCATCACGACTGTGATCCTCCCATATTGCATAGAGACATCAAACCAAAGAATATACTCCCTGATTCTGAGATGCAACCTCGTATTACTGATTTTGGTATTTCCATTGCTTTGAATCAATCCACTACTACAATGCATATTCGGTCAACATATCATCTAGGTACACTTGGGTTTATGGCACCGGAGATTGCATGTGTAATAGTGCCAAGCTGTGAACTTGATATATATAGTTACGGTGTAGTTTTGCTAGAGCTGATAACTAGAAAGAAAGTATTAGATTCCTCATTCATGGTGGAGGAAACCACATTAGTAGGGTGGTTTAAATCTGTATGGAGGACAACCAGAGAACTTGAAGAGATTGTTGATTCAAGCATTGCAAGGGAGCTTTCAGATTTAAATGTAATGGTGCAAGTTATCAAAGTGATTTTGGTGGCTTTGATATGTACCGAGACAGATCCAGGAAAGAGACTGAAAATGAGAGATGTTGTGGAATTTTTTGAAACATCCACAGATCCAGGTAACAGTTGTGTCCGCTTGACAATAACAAGTGTTAATAACATTCATGAAATCATAGTTCTACTGCATGATAGAATTTTTGTTCGATATTATGGAGAATTTCATTTGGGAAGTTCTCTTGCTACTGCGGCAGCCTCTATGTTTTTTCAGGAGGAAGCCACGATCCCTGCCAATAGAGATTATTCCTCAATTCTTCACGAGGTGATGGAGGCTACTGCAAACCCAAACAATCTGAATATTATCGGCAGAGGAACTCATGGAGTTGTTTATGAAGTTCCACTTGGTCAAGACCTAGTTTATGCTGTAAAGAAGCTTGAATTTGCAGGGAACAAAAGAAAGATCCAAACCATAGTTAGAGAGATCAAAATCCTGATAAAGATTAGGCACAGAAATCTTGTTGGATTACTAGACTTTTCGTTCACAAAGAACTATGGTATAATTTTATACAGTTACATGCCAAATGGAAACCTTCATGATGTTTTGCATGAAAAGAATCCACCACTATCCCTAGTTTGGACTGTCCGGCATAAGATAGCAGCTGGAATTGCTCATGGATTGGCTTATCTCCATTATGACTGTTATCCCGCCATTCTGCACCGTGCCATCAAACCAAAAAATATACTTTTAGATTATGATATGGAGCCTCGTATTGCTGATTTCAGTATTGCCAAGCTTTTGGATCAATCTTCTTCGAGACCATCTTCATCTGTTCCAGAGAATACATATTCAACAGCAAATACTAGGGAATCTGATGTCTACAGTTTTGGGGTAGTTTTGCTTGAGTTGATTACTAGAAAGAAGGCAGTGGATCCATCATTTATGGAGGGAACTGAGATAGTGGGTTGGGTCAAAACTCTATGGCAGGAAACAGGAGGAATTTATAAAATTATTGACTCAAGCCTAGTTGAGGAGGTTATGAATCCAAATATTCTTAAACAAGTTATCAATGTGCTTTTGGTGGCACTAAGGTGCACTGAGGAGGATCCTGACATGAGACCAACAATGAGAGATGTTATCAACCAATTGGAAGATGCATATATTTGA 4032 0.3931 MVSVVDVHLQIKDGKTKCVNLSNVSTLKLPPRNCTTSLELFAFVLSHWTSVPPSLNSSWNSSDSSPCLWTGIQCDKYGKVISLNLTAYSIFGHLGPEIGQLTHLRNLVLVANGFSGTMPLELGNCSLLEYMDLSDNYFSGSLPYTLKTLQKLKYVRFSSNLLAGGIPESLFHIPKLQGIDLHNNDLSGPIPFDIGNTTELLKLHLSGNQLSGTIPSSIGNCSKLEALFVNDNILTGILPQSLNNLKNLVYLDVKNNTLGGTIPLGSGSCDKLFILDLSFNVFSGGIPSSLGNCSNLVELAAMKSSLAGSIPSSLGLLLKISILRLPENHLSGNIPPEIGNCKSLKKLHLYSNQLGGTIPNELGGLSKLEDLELYSNHLTGEIPFTIWKIQNLKHALLHNNSLSGKLPSEMTELKHLKNISLFDNQFFGLIPQNLGINSSLVKLELMNNKFTGDIPPNLCFGKQLRTLSLGLNQLQGGIPQDLGRCATLGRLVLNENNLSGSLPEFEGNHNLIYMDMSKNNISGVIPSSLGNCTSLTALILSMNNIRGIIPLELGNLVNLQALNLAHNNLEEVNISYNSFVGPLPEWKTQRLNLSSSSVMGNPGLWVLCSTSNGSSCTTNHNGSRHSILFIALGFVGFVICLSEILLIYDHHSRHRSNEGVLTYPNEQIYIHQMGQRPELKANFADYKLQEASYSNDEGDFRIINLMNVMENFHDRYIIGEGGHGIVYKAKLDIGVFAIKKVNFGQSNRRKVNMIREIEMTRKIRHQNAARCLGSWMGEEYGLTISRYMENGSLHDVLHENDPLPYLAWNVRYKIAIGIAKGLAYLHHDCDPPILHRDIKPKNILPDSEMQPRITDFGISIALNQSTTTMHIRSTYHLGTLGFMAPEIACVIVPSCELDIYSYGVVLLELITRKKVLDSSFMVEETTLVGWFKSVWRTTRELEEIVDSSIARELSDLNVMVQVIKVILVALICTETDPGKRLKMRDVVEFFETSTDPGNSCVRLTITSVNNIHEIIVLLHDRIFVRYYGEFHLGSSLATAAASMFFQEEATIPANRDYSSILHEVMEATANPNNLNIIGRGTHGVVYEVPLGQDLVYAVKKLEFAGNKRKIQTIVREIKILIKIRHRNLVGLLDFSFTKNYGIILYSYMPNGNLHDVLHEKNPPLSLVWTVRHKIAAGIAHGLAYLHYDCYPAILHRAIKPKNILLDYDMEPRIADFSIAKLLDQSSSRPSSSVPENTYSTANTRESDVYSFGVVLLELITRKKAVDPSFMEGTEIVGWVKTLWQETGGIYKIIDSSLVEEVMNPNILKQVINVLLVALRCTEEDPDMRPTMRDVINQLEDAYI 1343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0569 1343 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 289 991 - -
Lele38g0569 1343 Gene3D Phosphorylase Kinase; domain 1 1045 1147 - -
Lele38g0569 1343 SUPERFAMILY L domain-like 42 299 - -
Lele38g0569 1343 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 788 998 - -
Lele38g0569 1343 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1148 1342 - -
Lele38g0569 1343 ProSiteProfiles Protein kinase domain profile. 1071 1343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0569 1343 SMART serkin_6 1071 1343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0569 1343 SMART serkin_6 712 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0569 1343 SUPERFAMILY Protein kinase-like (PK-like) 1059 1338 IPR011009 -
Lele38g0569 1343 ProSitePatterns Protein kinases ATP-binding region signature. 718 740 IPR017441 GO:0005524
Lele38g0569 1343 SUPERFAMILY RNI-like 179 575 - -
Lele38g0569 1343 SUPERFAMILY Protein kinase-like (PK-like) 701 990 IPR011009 -
Lele38g0569 1343 Gene3D Ribonuclease Inhibitor 301 399 IPR032675 -
Lele38g0569 1343 Gene3D Ribonuclease Inhibitor 193 300 IPR032675 -
Lele38g0569 1343 Gene3D Ribonuclease Inhibitor 40 192 IPR032675 -
Lele38g0569 1343 Pfam Leucine rich repeat N-terminal domain 52 75 IPR013210 -
Lele38g0569 1343 Pfam Protein kinase domain 1074 1336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0569 1343 Pfam Protein kinase domain 713 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0569 1343 ProSiteProfiles Protein kinase domain profile. 712 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0569 1343 Gene3D Ribonuclease Inhibitor 509 617 IPR032675 -
Lele38g0569 1343 Gene3D Ribonuclease Inhibitor 400 508 IPR032675 -
Lele38g0569 1343 Gene3D Phosphorylase Kinase; domain 1 692 784 - -
Lele38g0569 1343 FunFam Leucine-rich repeat receptor-like kinase 42 150 - -
Lele38g0569 1343 FunFam Leucine-rich repeat family protein 269 504 - -
Lele38g0569 1343 ProSitePatterns Protein kinases ATP-binding region signature. 1077 1100 IPR017441 GO:0005524
Lele38g0569 1343 Gene3D Transferase(Phosphotransferase) domain 1 1148 1342 - -
Lele38g0569 1343 Gene3D Transferase(Phosphotransferase) domain 1 788 1002 - -
Lele38g0569 1343 FunFam Leucine-rich repeat receptor protein kinase EMS1 166 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0569 Lele-ChrLele38 4803730 4809684 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0569 1041 1340 Receptor kinase-like Gene Family AT1G73080 47.923 2.08e-84 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele38g0569 Pkinase 3.5e-33 CL0016