Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0568 ATGAGGCATCTCTGGTTGCTTCTTCTTCCTCTATGCTTTTCTTCCTTGTTATGCTCTGTTTCTGCTTTGAGCTCTGATGGGGTGGCTCTATTGTCACTCTTGAGGCACTGGACTTCTGTGCCTCATCCTGTAAAATCCACCTGGAGTCTCCCAGATTCCACTCCTTGCTCTTGGCTTGGAATCCGGTGCGACCATTCCCACAATGTGATCTCCCTCAACCTCACTGATTATGGGATTGAGGGTAAAATAGGACCTGAGATTGGACTTTTGAGTCACTTACAGAGCCTTGTATTGATCAATAATGGCTTCTCTGGAAAAATTCCTTCTGAGTTAGGGAATTGTAGTCTTTTAGAATACTTAGAACTTTATGGAAACAACTTCAGTGGAAAAATACCTATGAGCTTCAAAAACTTGCAGAATTTGAATTATTTCAGCCTTCCTTATAATCAACTCACTGGTCAAATCCCTGAATTCATCACCCAAATCCCTAACCTGCAATTTGTGGACTTGTCTTTTAACTCTCTCACTGGTTCAATTCCTTCAGAAATAGGAAACATGAGTGAGCTTTTGATCTTGTATCTACACAATAATCAGTTGTCTGGTGAAATTCCTTCATCAATTGGGAATTGCAGTAAATTGCAGGACTTGACTTTGAATGAGAATAAGTATCATGGAAATCTTCCAGAGACTCTTAACAATCTCCATGATATTCTTTATTTGAACTTTGCTTCTAATAATCTTAGTGGTAAGGTTCCATTGGGTTCTGGAAATTGTAAGAATTTGTCTTTTTTGGATCTGTCATATAATGTATTCAGTGGAGGTATTCCTTCAAGCTTGGGAAATTGTAGTGGCTTAACGACATTTTCTGCGGTTAGCAGTGGCTTTACTGGCAGTATTCCATCCTCCATCGGTTTGCTTGGCGAGCTTTCCCTTTTATGGCTTCCCGTGAATCATTTGTCCGGGAAAATACCTCCAGAGATTGGCAATTGTAAGTCTTTGACACAGTTGCATTTGTATTCCAATCAACTCGAGGGAGAAATTCCTAGTGAGTTGGGGGAGTTGAGTGAATTGCAGGATCTTGAATTGTTTTCCAACCGTTTGACCGGCGAAATTCCTCTCGGTGTTTGGAAGATTCAAAGTCTAGAGCAAATCCTTGTGTACAATAATAGCCTCTCTGGGGAGCTACCTTTGGAGATAACAGAGCTCAAGCATCTGAGTAATATCTCATTGTTTAACAACCACTTCTCCGGAGTGATACCTCAAACTTTGGGAATCAAAAGCCGATTAGTACTGTTGGACTTAACGAATAATAAGTTTACCGGTAACATCCCACCAAATCTTTGTTCTGGAAAGAAATTAACTTTGCTGACTATGGGGTTTAATCAGCTTCAAGGTAGCATACCTCCAGATGTAGGAATGTGTACAACTCTTAGAAGGTTGATTCTCAAAGAAAATAATTTTACGGGGCCCTTACCAGATTTTGAATACAATCCGAATCTCACTTTCATGGATATCAGTGGAAACAATATCAATGGCTCAATCCCACCAAGTTTGGGAAATTGCTCAAATGTCACTGATTTAATTCTGTCGAATAACAACCTTGCAGGGCATATACCGAGGGAGCTAGGTCGCCTTGTAAACCTGAAGACTCTGCATCTTGATCACAACCACTTGGAAGGTCCTTTGCCACCTGAGCTGTCAAAATGTACTAAAATGGACAGTTTTGATGTGGGATCCAATTTCCTGAATGGTTCATTTCCGCCGACTTTGAGGAGCTGGACGGCGTTAACCACATTAATTTTAAGAGAGAATCGTTTTCATGGTGGCATTCCTGATTTCTTGTCAGAAATTAACAAGCTCTCTGAGCTACAGCTTGGTGGAAACATGTTTGGAGGAAAGATTCCAGGATCAATCGGGGCATTGCAGAATCTGCGCTACGGGTTGAATCTAAGTGCTAATGGGCTGATTGGTGAAATTCCTCAAGAGATGGGAAAATTAATGAATCTGCTAGATCTGGATCTATCTCGAAACAATTTGACTGGAAGCATAGGAGTCCTCGCCGAGCTTTCTTCATTACTTAAAGTCAATGTTTCATACAATTCCTTCAATGGCCCTATACCGGAGACGCTGATGAAGCTGTTTAATTCTGATTCTTCATCATTTTCGGGAAATCCCAGCCTGTGTATCAGTTGTTCATCATCAAACAGATCGGATTGCGATCAGAGCGGCCGTCATCTAAAGCCATGTGATGATAGATTGACAAACAAGAAAGGGCTTAGTAAAGTACAAGTAGCAATGATAGCACTTGGATCATCAATATTTTTTGTTCTTTTGCTGCTGGGAGTAACCTACATGTGTGTACGTGGTGGAAAACCGAAGCAGGAAGTTGAGATCGCCGCCAAAGAAGGCACGTCCTTGCTTCTTAACAAAGTGATGGAGGCTACTGCTAACCTAAGTGACCGGTTTATCATTGGTAGAGGAGCTCATGGAGTAGTTTATAAAGCTTCAATAGATGCAGGCCAAGTTTTTGCTGTGAAGAAGCTTGCATTTTCTGGGAACAAAGGCAAGAGCATGATTAGAGAAATTCAAACCCTCGGAATGATTAGGCACCGAAATCTGGTCAAATTGGAAGACTTTTGGTTGAGAAAAGACTTTGGTCTGATCTTGTACCCCTACATGCCAAATGGAAGCCTTCATGAAGTCTTGCATGAAAAGCATCCACCGCCATCCTTAGAGTGGAACGTCCTATATAAGATAGCCATTGGAATCGCTCATGGATTGGCCTATCTCCATTTTGATTGTGATCCTCCCATATTACACCGCGACATCAAACTGAAAAACATACTCCTAGATTCTGATATGGAGCCTCACATTGCTGATTTCGGTATCGCCAAGCTTTTGGATCAATCTTCTATTTCAGCACCATCTATATTTGTCCCGGGCACTGTAGGGTATATTGCACCAGAGAACGCATATACGACAGCAAACAATAGAGAATCTGATGTATACAGTTATGGGGTAGTTTTGCTTGAGTTGATAACCAGAAAGAAACCAGTGGATCCATCGTTCATGGAGGGAGTTGATATAGTAAGCTGGGTCAGAACTCTGTGGGGTGAAACAGAAGATATTCATAAGATTGCTGATTCAAGTCTTGCAGGGCAGTTTCTGGATTCAAATGTTCTTGAACAAGCTACCAAAGTGCTTTTGGTGGCCCTGAAATGCACCGAGAAGGATCCACGTGTGAGACCCACAATGAGAGATGTTATCAAGCAATTAGAAGATGCTAATTCAAGGACAAGGAGTAAAAAGCTTCCAAGTTCCCACTTCTTAATCCATAGTTGA 3342 0.4144 MRHLWLLLLPLCFSSLLCSVSALSSDGVALLSLLRHWTSVPHPVKSTWSLPDSTPCSWLGIRCDHSHNVISLNLTDYGIEGKIGPEIGLLSHLQSLVLINNGFSGKIPSELGNCSLLEYLELYGNNFSGKIPMSFKNLQNLNYFSLPYNQLTGQIPEFITQIPNLQFVDLSFNSLTGSIPSEIGNMSELLILYLHNNQLSGEIPSSIGNCSKLQDLTLNENKYHGNLPETLNNLHDILYLNFASNNLSGKVPLGSGNCKNLSFLDLSYNVFSGGIPSSLGNCSGLTTFSAVSSGFTGSIPSSIGLLGELSLLWLPVNHLSGKIPPEIGNCKSLTQLHLYSNQLEGEIPSELGELSELQDLELFSNRLTGEIPLGVWKIQSLEQILVYNNSLSGELPLEITELKHLSNISLFNNHFSGVIPQTLGIKSRLVLLDLTNNKFTGNIPPNLCSGKKLTLLTMGFNQLQGSIPPDVGMCTTLRRLILKENNFTGPLPDFEYNPNLTFMDISGNNINGSIPPSLGNCSNVTDLILSNNNLAGHIPRELGRLVNLKTLHLDHNHLEGPLPPELSKCTKMDSFDVGSNFLNGSFPPTLRSWTALTTLILRENRFHGGIPDFLSEINKLSELQLGGNMFGGKIPGSIGALQNLRYGLNLSANGLIGEIPQEMGKLMNLLDLDLSRNNLTGSIGVLAELSSLLKVNVSYNSFNGPIPETLMKLFNSDSSSFSGNPSLCISCSSSNRSDCDQSGRHLKPCDDRLTNKKGLSKVQVAMIALGSSIFFVLLLLGVTYMCVRGGKPKQEVEIAAKEGTSLLLNKVMEATANLSDRFIIGRGAHGVVYKASIDAGQVFAVKKLAFSGNKGKSMIREIQTLGMIRHRNLVKLEDFWLRKDFGLILYPYMPNGSLHEVLHEKHPPPSLEWNVLYKIAIGIAHGLAYLHFDCDPPILHRDIKLKNILLDSDMEPHIADFGIAKLLDQSSISAPSIFVPGTVGYIAPENAYTTANNRESDVYSYGVVLLELITRKKPVDPSFMEGVDIVSWVRTLWGETEDIHKIADSSLAGQFLDSNVLEQATKVLLVALKCTEKDPRVRPTMRDVIKQLEDANSRTRSKKLPSSHFLIHS 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0568 1113 FunFam Leucine-rich repeat family protein 25 181 - -
Lele38g0568 1113 SUPERFAMILY L domain-like 26 288 - -
Lele38g0568 1113 SUPERFAMILY RNI-like 408 726 - -
Lele38g0568 1113 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Lele38g0568 1113 ProSiteProfiles Protein kinase domain profile. 818 1111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0568 1113 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 784 892 - -
Lele38g0568 1113 Gene3D Ribonuclease Inhibitor 173 237 IPR032675 -
Lele38g0568 1113 SMART serkin_6 818 1099 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0568 1113 FunFam Leucine-rich receptor-like protein kinase family protein 323 421 - -
Lele38g0568 1113 Pfam Leucine rich repeat 498 558 IPR001611 GO:0005515
Lele38g0568 1113 SUPERFAMILY L domain-like 294 464 - -
Lele38g0568 1113 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 451 737 - -
Lele38g0568 1113 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 452 1093 - -
Lele38g0568 1113 SUPERFAMILY Protein kinase-like (PK-like) 806 1092 IPR011009 -
Lele38g0568 1113 SMART LRR_typ_2 545 569 IPR003591 -
Lele38g0568 1113 SMART LRR_typ_2 90 114 IPR003591 -
Lele38g0568 1113 SMART LRR_typ_2 186 210 IPR003591 -
Lele38g0568 1113 SMART LRR_typ_2 330 354 IPR003591 -
Lele38g0568 1113 SMART LRR_typ_2 162 185 IPR003591 -
Lele38g0568 1113 ProSitePatterns Serine/Threonine protein kinases active-site signature. 938 950 IPR008271 GO:0004672|GO:0006468
Lele38g0568 1113 ProSiteProfiles Leucine-rich repeat profile. 668 690 IPR001611 GO:0005515
Lele38g0568 1113 Gene3D Ribonuclease Inhibitor 473 739 IPR032675 -
Lele38g0568 1113 Gene3D Ribonuclease Inhibitor 239 472 IPR032675 -
Lele38g0568 1113 Gene3D Transferase(Phosphotransferase) domain 1 893 1108 - -
Lele38g0568 1113 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 182 275 - -
Lele38g0568 1113 Gene3D Ribonuclease Inhibitor 22 172 IPR032675 -
Lele38g0568 1113 Gene3D Phosphorylase Kinase; domain 1 784 892 - -
Lele38g0568 1113 ProSitePatterns Protein kinases ATP-binding region signature. 824 847 IPR017441 GO:0005524
Lele38g0568 1113 FunFam Serine/threonine-protein kinase-like protein CCR4 893 1109 - -
Lele38g0568 1113 Pfam Protein kinase domain 823 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0568 Lele-ChrLele38 4792282 4796247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0568 14 1101 Receptor kinase-like Gene Family AT1G73080 52.899 0.0 1068
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele38g0568 Pkinase 8.2e-43 CL0016