Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0564 ATGCATAGTTTGATAGACCGTATATCCCATAAACTTCTCTTCTTCACTTTTTGTGACACTATCAGAGAAAGTGTTTTCTATTTATTAACCTTGGCTGGCTTGCAGATGGGTTCTGTAGAGGGGGAGAAGATAGTCCTCGATTTTGATGAAGAGTTCGGTTCTGGCTCTGTAGAACTTGTGAGAGAAGATACTTATTTTGATGTTGAGACAACACAAGAGGCAAACCCAACCATGCTCAGAAAAATATTGGCAAGATCAATCAGGAGCTTACACTTCGTTATATTTAAGGAAAAAATCTGCCGGATGCTACCTTTTGGTCCCTTGGCAGTCTTGCTGCATTATCTTACTGGAATAGAAGTACGCAATGCAACTGCAGTTCTTGAATATTTTTATTGGTCTTTGCCTGCTTTGATTAGTATAATAGGAAAGAAATGTAGAATAGCAGTGAGGCTTTTTTCTCTTGGGGACTTTAAACTCATGCTGCTTCATATGTTATTACAGAATATTGTGTTTTATTCGGCCTTATTGGGCATGATTCCTTTGAGCAATCGACTAAATTATGCTTCCAAGCAGCTTGCTTATTACACTCAACCAATAGTGAGGGTTTATCTGTTAGCCTTGTTTGGCAATGCAACTGATATGATTATATCGATTCATGCTTTGAGAAAGGGAATGTTGAGCACTGTTTATGAGTCTTTACTGGGTTCTGTCTTGTCAAACATGCTTCTTATTCCTGGTTGTGCTTTCTTTACTGGTGGGATCGTCCACTCTATCAGGATTCAGTTCTTCAGTAAGGCATCTGCTAGTGCAAAATCTGGGTTGCTCTTGATGGCTGTGATGGGAATACTGTTTCCTTCTGTGCTGCACTTTACTCACACAGAAGCCCATTATGGAAGATCAGAGTTATCGCTATCCAGATTTAGTAGCTGTATAATGCTAGTGGCATATGCCAGTTACCTCCGTTTTCAACTTCAAATTAAGCAGAGTCTTGATGATACTCTTACTCAGGAAGGTGATGAAGAGGAAGTATGTGAATTAAGCAAATGGGAAGCAATAGGCTGGTTGGCTCTATTAATAGCTTGGACATCTGTATTGACAAAACACCTTGTCGATGTGATCCGGGTCACATCAGAGTCAACAAACATACCACAGACTGTTATAACAGTTATTTTGCTTCCTCTTGTAGAACATGCAGATGCCATCATGTTTGCCATTAAGGACAAGCTGGACTTTACACTTGAAGATGCTATTGGATCATCTATACGACTAATTATGTTTGTGATGCCCATCAGCGTACTTGTTGGCTGGTCCATGGGACGAACTATGCTCTTGAATTTTTCACTTTTCGAGACAACTGTACTACTTATATCTGTCCTAATTGTAGCATATGCTCTGCAGGATGGGAGCTCACATTATTTTAAAGGCTTGATGCTCTTTCTATGCTATTTGAATGTTGCGGCCAGTTATTTTGTACATGTAGATTCTTCAAGTGATGAGTTTGACTAA 1506 0.3951 MHSLIDRISHKLLFFTFCDTIRESVFYLLTLAGLQMGSVEGEKIVLDFDEEFGSGSVELVREDTYFDVETTQEANPTMLRKILARSIRSLHFVIFKEKICRMLPFGPLAVLLHYLTGIEVRNATAVLEYFYWSLPALISIIGKKCRIAVRLFSLGDFKLMLLHMLLQNIVFYSALLGMIPLSNRLNYASKQLAYYTQPIVRVYLLALFGNATDMIISIHALRKGMLSTVYESLLGSVLSNMLLIPGCAFFTGGIVHSIRIQFFSKASASAKSGLLLMAVMGILFPSVLHFTHTEAHYGRSELSLSRFSSCIMLVAYASYLRFQLQIKQSLDDTLTQEGDEEEVCELSKWEAIGWLALLIAWTSVLTKHLVDVIRVTSESTNIPQTVITVILLPLVEHADAIMFAIKDKLDFTLEDAIGSSIRLIMFVMPISVLVGWSMGRTMLLNFSLFETTVLLISVLIVAYALQDGSSHYFKGLMLFLCYLNVAASYFVHVDSSSDEFD 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0564 501 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 79 494 IPR004713 GO:0006812|GO:0008324|GO:0016020
Lele38g0564 501 FunFam Vacuolar cation/proton exchanger 198 337 - -
Lele38g0564 501 Pfam Sodium/calcium exchanger protein 169 324 IPR004837 GO:0016020|GO:0055085
Lele38g0564 501 Pfam Sodium/calcium exchanger protein 352 484 IPR004837 GO:0016020|GO:0055085
Lele38g0564 501 Gene3D - 338 490 IPR044880 -
Lele38g0564 501 Gene3D - 198 337 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0564 Lele-ChrLele38 4741387 4745243 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0564 87 498 Antiporters AT3G13320 50.355 1.44e-130 384