Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0562 ATGCGAAGAATCTTAAAATGTGTTCAGAAGCAAAAAAGCTGGATCCATCTTGAAGATCTTAGTACTCTTCAGTTCAAATCCAGGTGTCTTTCTCAGGCAATTTTCTTTATCCTCTATCTTTTGCCATTGATCTGGTTATTTGATGAGCTTGGTTATTGCTGCCCCTTTTTTTTCTTGGTTATGGGTTCTGCAGAGGATAAAATAGACCTTGACTCAGATGAGGAGATTGCTTTTAGACCGTCACCATCTGCAAGAAAAGTCCATACATTTGATTTTGAGACAGAACATGTCCTTTCTCCTGAAAATTTGGCAAGCTCATCCTTCTTTGTAACAGATGAACTTGCTTACATTTGGTGCAGGCAGCTTGCATTTTATACTGGACCAACAGTTGGAGGTCTGCTGAATGCCACATTTGGCAATGCCACTGAAATGATTATATCAATTTATGCTTTGAAAAATGGGATGATTAGAGTTGTTCAGCAGTCTCTATTGGGGTCAATTCTATCAAATATGCTTCTGGTTCTTGGATGTGCCTTCTTTACTGGAGGTATTGTCCATCGCAATAAGATTCAGCTTTTCAACAAGGTAGCTGAAATATGGTTTGCAATGTTTCCTTCCATTCTTGCCCTCTTTATGTTCCATAACATCACACTGAAAAGGTTGCTCTTGATGGCTGTGATGGGAATACTGTTTCCTGCTGTTCTTCACTTTACTCACTCTGAGGTTCATTTTGGAAAATCAGAGTTATCATTATCCAGATTTAGTAGCTGTATAATGCTCGTGGCATATGCAAGCTACCTTTTCTTTCAATTAAGAAGTCAGCATAATCTTTATAGCCCTATTGAACCGGAGGATGGTAATAGTGAAAATGATGATGAGGAAGAAGTTGAATTAGCTCAGTGGGAAGCAATAGGCTGGCTTGCTATTTTGACAATATGGGTATCTGTATTGTCCGGATACCTTGTGGATGCAATACAGGGGGCATCTGACTCATTGCATATGCCTGTGGCTTTTATTAGTGTCATATTGCTTCCAATTGTAGGCAATGCTGCTGAACATGCAAGTGCTATAATGTTTGCCATGAAGGATAAGCTTCCGACTCCATCTAGTGGGATAAGGCTTGTTATACTGCCTACTTTACTGATAGAGTCATTTTCTCTTAAGGACATCACACTTGGAGTTGCTATTGGATCTTCTACACAGATATCAATGTTTGTGATCCCTTTCTGTGTTGTTGTTGGGTGGTGCATGGGAAAAGAAATGGACTTGAACTTTCAACTCTTCGAGACGGCCACACTTTTTATCACAGTGCTTGTAGTTGCATTTATGTTGCAGGTTGTAAGATTATCTCAATTAGATCAGCCTTGTGGCAAACCTATTGAACTTACCAAAGAGGGGCAACTCAATAAGAATACATGA 1419 0.3946 MRRILKCVQKQKSWIHLEDLSTLQFKSRCLSQAIFFILYLLPLIWLFDELGYCCPFFFLVMGSAEDKIDLDSDEEIAFRPSPSARKVHTFDFETEHVLSPENLASSSFFVTDELAYIWCRQLAFYTGPTVGGLLNATFGNATEMIISIYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHRNKIQLFNKVAEIWFAMFPSILALFMFHNITLKRLLLMAVMGILFPAVLHFTHSEVHFGKSELSLSRFSSCIMLVAYASYLFFQLRSQHNLYSPIEPEDGNSENDDEEEVELAQWEAIGWLAILTIWVSVLSGYLVDAIQGASDSLHMPVAFISVILLPIVGNAAEHASAIMFAMKDKLPTPSSGIRLVILPTLLIESFSLKDITLGVAIGSSTQISMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFMLQVVRLSQLDQPCGKPIELTKEGQLNKNT 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0562 472 Gene3D - 293 457 IPR044880 -
Lele38g0562 472 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 119 445 IPR004713 GO:0006812|GO:0008324|GO:0016020
Lele38g0562 472 FunFam Vacuolar cation/proton exchanger 128 284 - -
Lele38g0562 472 Pfam Sodium/calcium exchanger protein 304 445 IPR004837 GO:0016020|GO:0055085
Lele38g0562 472 Pfam Sodium/calcium exchanger protein 107 271 IPR004837 GO:0016020|GO:0055085
Lele38g0562 472 Gene3D - 128 279 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0562 Lele-ChrLele38 4730949 4736118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0562 110 445 Antiporters AT3G13320 64.012 2.23e-139 406