Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0560 ATGGGTTCCACAGAGACCGCCACCAAGCCTCAGAAAGAGTTCATCTTCAGGTCCAAACTTCCCGACATCTACATCCCAAAACACCTTCCTCTTCATTCTTACTGCTTCGAGAATCTCTCCGAATTCGGCTCCCGTCCTTGCCTGATCAATGCCCCCACCGGCGAAATCTATACTTACTACGACGTCGAGCTCACCGCCCGGCGAGTCGCCTCCGGATTGAACAAATTCGGCGTCGGACAGGGTGACGTCATCATGGTCCTCCTTTCCAATTCCCCTGAATTCGTCTTCTCCTTCCTCGGCGCCTCCCTCCGCGGCGCCATGACAACCGCCGCGAATCCCTTCTTCACTGCCGCCGAGGTTGCCAAACAATTCAAAGCCTCCAACGCGAAAATCCTCATAACTCAATCAGCCTACTACGAGAAAGTGAAGGACCTCGACGTGAAACTAATCTTCGTCGATTCTCCTCCGGACGGACAATCTCATTTCTCAGAGCTATCTCAAGCCGACGAGAACGATATGCCCGAGGTCAAAATCAAACCGGACGACGTCGTAGCATTGCCGTATTCTTCCGGCACCACCGGGTTACCAAAAGGAGTCATGCTCACTCACAAGGGATTGGTGACGAACATAGCCCAACAAGTCGACGGAGAGAATCCGAACCTGTATTTCCACCATGAAGATGTGATTCTCTGTGTGCTTCCCCTGTTTCATATCTACTCCTTGAACTCTGTTTTGCTGTGTGGATTGAGGGCCAAGGCGGCGATCTTGTTGATGCCCAAGTTTGAAATCAATGCGTTGTTGGGCTTGATACAGACACACAAGGTGTCGATCGCGCCGGTAGTGCCGCCAATCGTGTTAGCCGTCTCAAAGACGCCGGATATTGATAAGTACGACCTGTCGTCTATCAGAGTATTCAAGTCCGGTGGGGCTCCTCTGGGTAAAGAACTTGAAGACTCTGTGAGAGCCAAGTTCCCAAAAGCCAGGCTCGGCCAGGGATATGGGATGACGGAGGCAGGACCGGTGTTGACAATGAGCTTAGCATTTGCAAAGGAACCTATGGAAGTGAAACCAGGAGCATGTGGAACAGTGGTGAGAAACGCAGAGATAAAGATTGTAGATCCCGACACTTCTGAGTCTCTGCCTGCTAATCACGCGGGCGAGATCTGTATTAGAGGCGACCAAATTATGAAAGGGTATTTAAACGATCCGGAGGCAACGAAAAGGACTATAGACGCGGAGGGGTGGTTGCATACGGGAGACATAGGCTACATCGATGACAACGATGAGCTGTTCATCGTTGACAGGCTGAAGGAGCTCATCAAATACAAGGCCTTCCAGGTGGCCCCCGCTGAACTTGAGGCCATCCTTCTCACTCATCGTCACATATCCGACGCCGCAGTGGTCCCAATGAAGGATGAATCAGCTGGAGAGGTGCCAGTTGCCTTTGTAGTCAGATCCAACGGTCACACTCAAACCACCGAGGATGACATCAAACAGTTTGTCTCCAAACAGGTGGTGTTTTACAAGAGAATAAGCAGAGTGTTCTTCATTGATGCAATTCCAAAATCACCCTCAGGCAAGATATTGAGAAAGGATCTCAGAGCAAGACTGGCTGCCGGTGCTGCTGCTAATTAA 1635 0.5089 MGSTETATKPQKEFIFRSKLPDIYIPKHLPLHSYCFENLSEFGSRPCLINAPTGEIYTYYDVELTARRVASGLNKFGVGQGDVIMVLLSNSPEFVFSFLGASLRGAMTTAANPFFTAAEVAKQFKASNAKILITQSAYYEKVKDLDVKLIFVDSPPDGQSHFSELSQADENDMPEVKIKPDDVVALPYSSGTTGLPKGVMLTHKGLVTNIAQQVDGENPNLYFHHEDVILCVLPLFHIYSLNSVLLCGLRAKAAILLMPKFEINALLGLIQTHKVSIAPVVPPIVLAVSKTPDIDKYDLSSIRVFKSGGAPLGKELEDSVRAKFPKARLGQGYGMTEAGPVLTMSLAFAKEPMEVKPGACGTVVRNAEIKIVDPDTSESLPANHAGEICIRGDQIMKGYLNDPEATKRTIDAEGWLHTGDIGYIDDNDELFIVDRLKELIKYKAFQVAPAELEAILLTHRHISDAAVVPMKDESAGEVPVAFVVRSNGHTQTTEDDIKQFVSKQVVFYKRISRVFFIDAIPKSPSGKILRKDLRARLAAGAAAN 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0560 544 CDD 4CL 25 532 - -
Lele38g0560 544 Gene3D - 437 540 IPR045851 -
Lele38g0560 544 FunFam Long-chain-fatty-acid--CoA ligase FadD 17 437 - -
Lele38g0560 544 FunFam 4-coumarate--CoA ligase 2 438 540 - -
Lele38g0560 544 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 535 - -
Lele38g0560 544 Pfam AMP-binding enzyme 39 442 IPR000873 -
Lele38g0560 544 Pfam AMP-binding enzyme C-terminal domain 451 527 IPR025110 -
Lele38g0560 544 ProSitePatterns Putative AMP-binding domain signature. 186 197 IPR020845 -
Lele38g0560 544 Gene3D - 9 436 IPR042099 -
Lele38g0560 544 SUPERFAMILY Acetyl-CoA synthetase-like 13 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0560 Lele-ChrLele38 4710233 4714946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0560 13 505 Monolignol Biosynthesis Gene Families AT1G51680 68.713 0.0 694