Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele38g0558 | ATGGCTCAAGACTCTGCTTTTGATCTTCTCTATGAATTGTTTTTCTTTTCTTCTTTCTTCTTCTCTTTCGTGGCCACCGAACTTCTCTGCGTTGAATATCCTTTTCTCTCTGCTCTGTTTTTCCAACATGAAGATGATCCCCATGTCCCATTAGCTATTGCCCAATATCCTCAACGCTCGCGGTTTCCAAAGAGAAAAAATTCTCCTTACCTCCTTTTGCCAGCATCATCATCATCATCACCACCATCATCTTCTTCTTCTTCTTGGACTATCCCAGAAACTAAGCATGTGAAGTCTTCAATTAAAACAGAGGAAGCCCTGCAGATTATATGTGAAATCTGTGCAGAAACAAAAAGAACTACCCAGATGATCAAGAACCAGACATGCGATCATTCATATTGCTCGGATTGTGTAACAAAACATGTGGCCATAAAAATCCAAGACACCATAGCAGCAGTTCCGTGTCCTGCTTTGGATTGTAAAACTGTTTATGATCTGGAAGCTTGTCGGCCATGGCTTCCAAAGGATTTACTTGAAAGGTGGGATCAAGCTCTATGTGAAGCTCTATTTCTGCAAGTGCCCAAATTTTACTGTCCCTTTAAGGATTGTTCGGCGATGATGCTGGTTGAGAATGAGGAAGATCAACGAGGTGCAGGGGCGACAGAGTGCCCTGTTTGCCATAGAATGTTCTGTCCAAGGTGTAATGTTCCATGGCATCCTGGAATTGACTGTGGAGAATATCAGAAACTGAATGAGAATGAAAGACAGAGAGAAGATCTTCTTGTGAGAAAGCTTGCTAAAGAAAAGAAATGGGGAAGGTGTCCTAAGTGTAAGTTCTATGTGGAGAAGATACATGGATGCTTGCATATCACTTGCAGGTGCAAATATGAGTTTTGTTATGCGTGTGGAAAAGAATGGAGTTCTACTCATGGAGGCTGCCAAAGAAATCAGATTATTTAA | 960 | 0.4156 | MAQDSAFDLLYELFFFSSFFFSFVATELLCVEYPFLSALFFQHEDDPHVPLAIAQYPQRSRFPKRKNSPYLLLPASSSSSPPSSSSSSWTIPETKHVKSSIKTEEALQIICEICAETKRTTQMIKNQTCDHSYCSDCVTKHVAIKIQDTIAAVPCPALDCKTVYDLEACRPWLPKDLLERWDQALCEALFLQVPKFYCPFKDCSAMMLVENEEDQRGAGATECPVCHRMFCPRCNVPWHPGIDCGEYQKLNENERQREDLLVRKLAKEKKWGRCPKCKFYVEKIHGCLHITCRCKYEFCYACGKEWSSTHGGCQRNQII | 319 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele38g0558 | 319 | SUPERFAMILY | RING/U-box | 255 | 315 | - | - | |
Lele38g0558 | 319 | PANTHER | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING | 78 | 315 | IPR031127 | GO:0004842|GO:0016567 | |
Lele38g0558 | 319 | SUPERFAMILY | RING/U-box | 109 | 188 | - | - | |
Lele38g0558 | 319 | ProSitePatterns | Zinc finger RING-type signature. | 129 | 138 | IPR017907 | - | |
Lele38g0558 | 319 | SMART | ibrneu5 | 254 | 313 | IPR002867 | - | |
Lele38g0558 | 319 | SMART | ibrneu5 | 179 | 244 | IPR002867 | - | |
Lele38g0558 | 319 | Gene3D | - | 242 | 318 | - | - | |
Lele38g0558 | 319 | Pfam | IBR domain, a half RING-finger domain | 194 | 244 | IPR002867 | - | |
Lele38g0558 | 319 | Pfam | IBR domain, a half RING-finger domain | 262 | 313 | IPR002867 | - | |
Lele38g0558 | 319 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 105 | 189 | IPR013083 | - | |
Lele38g0558 | 319 | ProSiteProfiles | Zinc finger RING-type profile. | 111 | 156 | IPR001841 | - | |
Lele38g0558 | 319 | FunFam | RBR-type E3 ubiquitin transferase | 246 | 317 | - | - | |
Lele38g0558 | 319 | SUPERFAMILY | RING/U-box | 184 | 249 | - | - | |
Lele38g0558 | 319 | FunFam | RBR-type E3 ubiquitin transferase | 106 | 192 | - | - | |
Lele38g0558 | 319 | Pfam | Zinc finger, C3HC4 type (RING finger) | 111 | 156 | IPR018957 | GO:0046872 | |
Lele38g0558 | 319 | ProSiteProfiles | TRIAD supradomain profile. | 107 | 317 | IPR044066 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele38g0558 | Lele-ChrLele38 | 4689038 | 4690489 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele38g0558 | 111 | 303 | C3H Transcription Factor Family | AT2G19610 | 28.500 | 7.73e-18 | 81.6 |