Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0553 ATGCATATCTTCACGAGAAATCTGGGTTTCAGACGCGAGATGAAGAAGAAGCATCCTGTTGTGGAGGTGGAGAAGAAGAAGTATCCGATTGGTGCCGAGCATTATGAACTCTACGAAGAAATTGGCCAAGGCGTGAGTGCCACAGTTCACCGAGCTCTTTGTAAACCGTTCAATGAAACTGTTGCCATCAAAATTCTTGATTTTGAACGCGACAATGCTAATCTGAATAACATTTTTCGTGAAGCACAAACAATGAACCTAATTGACCACCCTAATGTCCTTAGATCACACTGCTCATTTGTTAGTGATCATAATCTCTGGTTTGTCATGCCATATATGGCTGGTGGTTCCTGTCTTCACATCTTAAAAGCGGCTTACCCTGATGGTTTTGAGGAGGTTGTAATAGCAACAATATTGCGAGAGGTATTAAAGGGTTTAGAATATCTTCATCAGCATGGGCATATACATCGAGATGTCAAAGTGAGTACTGATGACTATGGTGCTGGGAACATTCTAATTGATCGCCATGGGGCAATCAAGCTTGGAGATTTTGGTGTATCTGCTTGTCTTTTTGATTCTGGTGACAGGCAACGCACACGGAATACATTTGTTGGGACACCCTGCTGGATGGCACCTGAGGTCATGGAGCAACTGCATGGCTATGACTTCAAGGCTGATATCTGGTCTTTCGGCATAACTGCATTGGAGCTTGCCCATGGGCATGCACCTTTCTCAAAGTATCCACCAATGAAGGTACTGTTGATGACATTGCAACATGCACCTCCTGGCCTTGATTACGAAAGGGATAGAAAGTTCTCTCATATGATTGCTAGCTGTTTAGTGAAAGATCCTTCAAAACGACCAACTGCCAAAAAGTTGTTAAAGCACTCATTCTTTAGGCAGGCTCGCTCAAATGATTATATTTCACGAAAGCTTTTGGAAGGGCTGCCTGCTTTAGGTGATCGCATTAAAGCCCTAAAGATAAAAGAAGAAGAAGACATGCTTGCTCAAGAGAAAATGCCTCATGGGCGAATGGAAGAAATATCTCAGAATGAATACAAGCGAGGAATTAGTGGCTGGAACTTCAATCTTGATGATATGAAGGCTCAGGCTTCCTTGGATTCTGATGACCTCATAGATGATAATGTAGGATGTTCAAATTCGTTTTCTACAATTGATGAACATAACAACCCATCATCAAGTCAAAACCAAAATCGCTCTCAAATTGCAGATATGGACAACACTGATGAGATGCAAAATAAATCAACTTCTATCTCCATAGTTGGCTCCACAATAAATGGCACCGAGTTAAAATGTGAGGATCATGATTCTAGCATCGCCAGTCCAAGGACTCCAACCTATAGGCAGGACATTTCACAAGCCTCTTCACCGCTTCTTGATAATCAGGTTGATCATAACATGAATTGCGGGAGGTCTGTAGAGGGCACAGCTATTCATTCCCTTCATGGTAGATTTTCAACGAGTGTCTCCCACGAAGTTACACCTGCATCTATTCAGGGAGAAAGGGAGAAGCCGCAACATCAGCCCCAGAACAACTTAAACTGCAATGCAACTACAGTTCTCCTAACGAGGGATGATACACATTCTGAACTTTCTCCTAAAGCTTCAAAATTGTCAGTTTCTAGTTCTGATGACAACGATGAGAAACCCAAGGTACAAGTTGTTCAGCAGAGAGGACGGTTTAAGGTTACATCTGAAAATGTTGACTTAGAAAAGGTGACTGATAACTCTGATGTGGTTCATCCTTCTTACTTCAAGACTAAATAA 1788 0.4211 MHIFTRNLGFRREMKKKHPVVEVEKKKYPIGAEHYELYEEIGQGVSATVHRALCKPFNETVAIKILDFERDNANLNNIFREAQTMNLIDHPNVLRSHCSFVSDHNLWFVMPYMAGGSCLHILKAAYPDGFEEVVIATILREVLKGLEYLHQHGHIHRDVKVSTDDYGAGNILIDRHGAIKLGDFGVSACLFDSGDRQRTRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQHAPPGLDYERDRKFSHMIASCLVKDPSKRPTAKKLLKHSFFRQARSNDYISRKLLEGLPALGDRIKALKIKEEEDMLAQEKMPHGRMEEISQNEYKRGISGWNFNLDDMKAQASLDSDDLIDDNVGCSNSFSTIDEHNNPSSSQNQNRSQIADMDNTDEMQNKSTSISIVGSTINGTELKCEDHDSSIASPRTPTYRQDISQASSPLLDNQVDHNMNCGRSVEGTAIHSLHGRFSTSVSHEVTPASIQGEREKPQHQPQNNLNCNATTVLLTRDDTHSELSPKASKLSVSSSDDNDEKPKVQVVQQRGRFKVTSENVDLEKVTDNSDVVHPSYFKTK 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0553 595 Pfam Protein kinase domain 35 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0553 595 SUPERFAMILY Protein kinase-like (PK-like) 33 300 IPR011009 -
Lele38g0553 595 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 24 583 - -
Lele38g0553 595 MobiDBLite consensus disorder prediction 548 562 - -
Lele38g0553 595 FunFam Serine/threonine-protein kinase BLUS1 24 112 - -
Lele38g0553 595 Gene3D Transferase(Phosphotransferase) domain 1 116 350 - -
Lele38g0553 595 CDD STKc_OSR1_SPAK 33 299 - -
Lele38g0553 595 ProSiteProfiles Protein kinase domain profile. 35 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0553 595 Gene3D Phosphorylase Kinase; domain 1 23 111 - -
Lele38g0553 595 MobiDBLite consensus disorder prediction 533 565 - -
Lele38g0553 595 ProSitePatterns Protein kinases ATP-binding region signature. 41 64 IPR017441 GO:0005524
Lele38g0553 595 FunFam serine/threonine-protein kinase BLUS1 isoform X1 116 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0553 Lele-ChrLele38 4647571 4653140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0553 23 591 MAP Kinase Kinase Kinase Kinase AT1G79640 62.823 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Lele38g0553 Pkinase 1.6e-55 CL0016