Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0543 ATGGTCATAAACGTGAAAGAGTCGACGATTGTGCGGCCGGCGGCCGAGACTCCGCGGAGAACGCTGTGGAATTCCAATGTCGATTTGGTGGTGGCGAATTTCCACACGCCGAGCGTGTACTTCTACAGGCCGACGACGGTGGGTACGTCGAGCTTCTTCGACGCTGACGTTCTCAAGGAGGCTCTGAGTAAGGTTCTAGTGCCTTTCTACCCAATGGCTGGGCGGCTCCGCTGGGATGACGATGGCCGCGTCGAGATTGACTGCAATGGCGAAGGCGTCCTCTTCGTGGAGGCCGAAACAGACAAAATCATTGACGATTTTGGTGACTTCGCTCCAACGATTGAACTACAGCAGCTCATTCCCGCCGTCGATTATTCCCTTGGAATCGAAACTTATCCCCTGTTAGTGTTGCAGATAACATATTTCAAATGTGGAGGGGTTTCACTTGGAGTTGGTATGCAACATCATGCGGCAGATGGATGTTCAGGTCTCTGGTTCATCAATACTTGGTCAGACATAGCTCGTGGCCTTGATCACACCATCACTCCCTTCATCGACCGGACCCTTCTCCGAGCTCAGGACCCTCCTAGACCGGTTTTTGATCACATCGAATACAAACCTTCTCCGGCCATGATCACTCCCTCCTCCTCCTTGCCACCATCACCAGCAAAACCAGGCACAGACCCATCACCACCACCACCAGCTGCAGTATCTATTTTCAAAATGACTCGTGACCAACTGAACCTTCTGAAATCCAAGTCCAAAGAAAATGGCAACACAATCAACTATAGCTCCTACGAGATGTTGGCTGGCCACGTGTGGAAGAGCGTGTGCAAGGCACGTGACTTACCCCATGAACAAGAAACCAAACTCTACATTGCTACTGATGGAAGGTCAAGATTGAAGCCAGCTCTCCCAGAAGGTTACTTTGGGAATGTGATATTCACAACCACACCAATGGCTATGGCTGGTGAACTCATGACAAAGCCAATTTGGTATGCAGCAAGCAAAATTCATGATTCCGTAGTGAGAATGGACAGTGAGTATCTGAGATCAGCTTTGGATTACCTTGAACTTCAACCTGATCTGAAAGCTCTTGTTCGTGGGGCTCATACTTTTAAGAGTCCAAATCTTGGGATCACTAGTTGGGTTAGATTACCAATAAATGATGCTGATTTTGGATGGGGAAGACCTATTTTCATGGGACCTGGTGGGATTGCGTACGAGGGACTGTCTTTTATAATACCAAGTTCTTCAAATGATAGCAGCTTATCTGTTGCCATTGCTCTCCAGCCTCACCATATGAAAGTGTTTCAGCAATTGTTTTATGACATTTAA 1338 0.4813 MVINVKESTIVRPAAETPRRTLWNSNVDLVVANFHTPSVYFYRPTTVGTSSFFDADVLKEALSKVLVPFYPMAGRLRWDDDGRVEIDCNGEGVLFVEAETDKIIDDFGDFAPTIELQQLIPAVDYSLGIETYPLLVLQITYFKCGGVSLGVGMQHHAADGCSGLWFINTWSDIARGLDHTITPFIDRTLLRAQDPPRPVFDHIEYKPSPAMITPSSSLPPSPAKPGTDPSPPPPAAVSIFKMTRDQLNLLKSKSKENGNTINYSSYEMLAGHVWKSVCKARDLPHEQETKLYIATDGRSRLKPALPEGYFGNVIFTTTPMAMAGELMTKPIWYAASKIHDSVVRMDSEYLRSALDYLELQPDLKALVRGAHTFKSPNLGITSWVRLPINDADFGWGRPIFMGPGGIAYEGLSFIIPSSSNDSSLSVAIALQPHHMKVFQQLFYDI 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0543 445 FunFam Tryptamine hydroxycinnamoyl transferase 222 443 - -
Lele38g0543 445 Gene3D - 219 445 IPR023213 -
Lele38g0543 445 MobiDBLite consensus disorder prediction 211 235 - -
Lele38g0543 445 Pfam Transferase family 3 443 - -
Lele38g0543 445 FunFam Spermidine hydroxycinnamoyl transferase 1 205 - -
Lele38g0543 445 Gene3D - 1 207 IPR023213 -
Lele38g0543 445 MobiDBLite consensus disorder prediction 213 235 - -
Lele38g0543 445 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0543 Lele-ChrLele38 4557557 4566400 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0543 1 445 Monolignol Biosynthesis Gene Families AT5G48930 72.584 0.0 674