Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0542 ATGGTCATAAGCGTGAAAGAGTCGACGATTGTGCGGCCGGCGGCCGAGACTCCGCGGAGAGAGCTGTGGAATTCCAATGTCGATTTGGTGGTGCCGAATTTCCACACGCCGAGCGGGTACTTCTACAGGCCGACGACGGTGGGCACGTCGAGCTTCTTCGACGCTGACGTTCTCAAGGAGGCTCTGAGTAAGGTTCTGGTGCCTTTCTACCCAATGGCTGGGCGGCTCCGCCGGGATGACGATGGCCGCGTCGAGATTGACTGCAATGGAGAAGGCGTCCTCTTCGTGGAGGCCGAAACAGACAAAATCATTGACGATTTTGGTGACTTCGCTCCAACGCTTGAACTCCGGCGGCTCATTCCCGCCGTCGATTATTCCCTTGGAATAGAAACTTATCCCCTGTTAGTGTTGCAGATAACATATTTCAAATGTGGAGGAGTTTCACTTGGAGTTGGTATGCAACATCATGTGGCAGATGGATGTTCAGGTCTCTGGTTCATCAATACTTGGTCAGACATAGCTCGTGGCCTTGATCACCCCATCACTCCCTTCATCGACCGGACCCTTCTCCGAGCTCAGGACCCTCCTAGACCGGTTTTCGATCACATCGAATACAAACCTTCTCCGGCCATGATCACTCCCTCCTCCTCCTTGCCCCCTTCACCAGCAAAACCAGGCACAGACCCATCACCAATACCACCAGCTGCAGTATCTATTTTCAAAATGACTCGTGACCAACTGAACCTTCTGAAATCCAAGTCCAAAGAAAATGGCAACACAATCAACTATAGCTCCTACGAGATGTTGGCTGGCCACGTGTGGAAGAGCGTGTGCAAGGCACGTGACTTACCCCATGAACAAGAAACCAAACTCTACATTGCTACTGATGGAAGGTCAAGATTGAAGCCAGCTCTCCCAGAAGGTTACTTTGGGAATGTGATATTCACAGCCACACCAATGGCTATGGCTGGTGAACTCATGTCAAAACCAACTTGGTATGCAGCAAGCAAAATTCATAATTCCTTAGTGAGAATGGACAATGAGTATCTGAGGTCAGCTTTGGATTACCTTGAACTTCAACCTGATCTGAAAGCTCTTGTTCGTGGGGCTCATACTTTTAAGAGTCCAAATCTTGGGATCACTAGTTGGGTTAGGTTACCAATAAATGATGCTGATTTTGGATGGGGAAGACCTATTTTCATGGGCCCTGGTGGGATTGCGTACGAGGGACTGTCTTTTATAATACCAAGCTCTTCAAATGATGGCAGCTTATCTGTTGCCATTGCTCTCCAGCCTCACCATATGAAAGTGTTTCAGAAATTGTTTTATGACATTTAA 1338 0.4873 MVISVKESTIVRPAAETPRRELWNSNVDLVVPNFHTPSGYFYRPTTVGTSSFFDADVLKEALSKVLVPFYPMAGRLRRDDDGRVEIDCNGEGVLFVEAETDKIIDDFGDFAPTLELRRLIPAVDYSLGIETYPLLVLQITYFKCGGVSLGVGMQHHVADGCSGLWFINTWSDIARGLDHPITPFIDRTLLRAQDPPRPVFDHIEYKPSPAMITPSSSLPPSPAKPGTDPSPIPPAAVSIFKMTRDQLNLLKSKSKENGNTINYSSYEMLAGHVWKSVCKARDLPHEQETKLYIATDGRSRLKPALPEGYFGNVIFTATPMAMAGELMSKPTWYAASKIHNSLVRMDNEYLRSALDYLELQPDLKALVRGAHTFKSPNLGITSWVRLPINDADFGWGRPIFMGPGGIAYEGLSFIIPSSSNDGSLSVAIALQPHHMKVFQKLFYDI 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0542 445 Pfam Transferase family 3 443 - -
Lele38g0542 445 FunFam Spermidine hydroxycinnamoyl transferase 1 205 - -
Lele38g0542 445 Gene3D - 231 445 IPR023213 -
Lele38g0542 445 MobiDBLite consensus disorder prediction 211 230 - -
Lele38g0542 445 Gene3D - 1 207 IPR023213 -
Lele38g0542 445 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 443 - -
Lele38g0542 445 MobiDBLite consensus disorder prediction 213 230 - -
Lele38g0542 445 FunFam Tryptamine hydroxycinnamoyl transferase 223 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0542 Lele-ChrLele38 4540430 4544136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0542 1 445 Monolignol Biosynthesis Gene Families AT5G48930 73.258 0.0 679