Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0541 ATGCATCTAATCAAACCTTTTATTGTTTTGAATGAAAGTGAAACCTCTATAAATGAAATGAAAGAACTGCCAAAGCATAAACATCAAAATCCTAGTGGGACAAGCGTCCGAGTAAGAGGCAGAGAGCGAGACGCTAGCGGGCATGACAGCATGGGTGACATTATCGCTCACTCTTTAAAGATGGGAATATACCTCAGCGCCCCAAAAACAGAGAAAGCTTCTGATGATGATGAGAATGACAGGTTTCGCTACGGTTTGTCTTCCATGCAGGGATGGCGAGCTACCATGGAAGATTCTCATGCAGCCCATCTAAATTTGGACGAGTCAACATCTTTCTTTGGTGTGTATGACGGCCATGGAGGTAAAGCTGTTGCTAAATTTTGTGCCAAGTATCTGCACTGGCAGGTGCTTAAGAATGAAGCATATGTAGCTGGAGATATAGGCACATCTTTGCAGAAAACTTTTCTCGGAATGGATGAGATGATGCGGGGACAAAGAGGGTGGAGAGAATTAGCAGTCTTGGGAGATAATATAGAAAAGTTGTCTGGTATGCTGGAGGGCTATGTATGGTCTCCTAGGGGTGAAGGCTATGACCATTCTGATGATTGGGTTCTTGAGGAGGGACCGCATTCTGATTTTACTGGACCAAACTCTGGATGCACAGCTTGTGTGGCAGTCATTCGAGGCAACCAACTTGTAGTTGCAAATGCTGGTGATTCTCGCTGTGTAATATCGAGAAAGGGCCAGGCACATAATCTATCTGAAGACCACAAGCCTGACCTTGAAGTTGAGAGAGATAGGATTATAAAAGCTGGTGGTTTCATACAAGTTGGGCGAGTTAATGGAAGTCTAAACTTGGCCAGAGCAATTGGAGACATGGAATTTAAGCAAAACAAGTTTTTGCCTGCTGAAAAGCAGATTGTGACCGCTGATCCGGATATAAATTCTGTTGAGCTTTGCGATGATGACGAGTTTCTTGTAATAGCATGTGATGGAATATGGGATTGCATGTCCAGCCAACAGCTTGTGGATTTTATACATTTACAGCTGAAGACGGAGAATAAACTATCTGCAGTTTGCGAGAAAGTATTTGATCGGTGCTTATCCCCTAAGTCTGGCGGCGAGGGATGTGACAACATGACCATGATCTTGGTTCAGTTCAAAAGGCCTTCGAGTCCTGATGATTCGATTACAGACAAGCCTCCTTCGTCTGCTCAGCCATCCAAGGCTGATGATGAGAGTTCGAATCAACCATCCAACAGCGAAAGAAGTTCAGACCAACCAATCTAG 1290 0.4426 MHLIKPFIVLNESETSINEMKELPKHKHQNPSGTSVRVRGRERDASGHDSMGDIIAHSLKMGIYLSAPKTEKASDDDENDRFRYGLSSMQGWRATMEDSHAAHLNLDESTSFFGVYDGHGGKAVAKFCAKYLHWQVLKNEAYVAGDIGTSLQKTFLGMDEMMRGQRGWRELAVLGDNIEKLSGMLEGYVWSPRGEGYDHSDDWVLEEGPHSDFTGPNSGCTACVAVIRGNQLVVANAGDSRCVISRKGQAHNLSEDHKPDLEVERDRIIKAGGFIQVGRVNGSLNLARAIGDMEFKQNKFLPAEKQIVTADPDINSVELCDDDEFLVIACDGIWDCMSSQQLVDFIHLQLKTENKLSAVCEKVFDRCLSPKSGGEGCDNMTMILVQFKRPSSPDDSITDKPPSSAQPSKADDESSNQPSNSERSSDQPI 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0541 429 CDD PP2Cc 82 387 IPR001932 -
Lele38g0541 429 SUPERFAMILY PP2C-like 63 389 IPR036457 -
Lele38g0541 429 FunFam probable protein phosphatase 2C 60 61 388 - -
Lele38g0541 429 PANTHER PROTEIN PHOSPHATASE 2C 60 386 IPR015655 GO:0004722|GO:0006470
Lele38g0541 429 ProSitePatterns PPM-type phosphatase domain signature. 112 120 IPR000222 GO:0043169
Lele38g0541 429 MobiDBLite consensus disorder prediction 388 429 - -
Lele38g0541 429 SMART PP2C_4 73 385 IPR001932 -
Lele38g0541 429 MobiDBLite consensus disorder prediction 22 50 - -
Lele38g0541 429 Pfam Protein phosphatase 2C 83 163 IPR001932 -
Lele38g0541 429 Pfam Protein phosphatase 2C 214 372 IPR001932 -
Lele38g0541 429 Gene3D - 60 388 IPR036457 -
Lele38g0541 429 ProSiteProfiles PPM-type phosphatase domain profile. 83 387 IPR001932 -
Lele38g0541 429 MobiDBLite consensus disorder prediction 396 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0541 Lele-ChrLele38 4523418 4535203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0541 61 396 PP2C-type Phosphatase Gene Family AT2G25070 73.977 0.0 546