Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0539 ATGACTTCAAGATCATTCCCTGCAACTCCAAGTCACAATCTTTTCACCAAATACAGGGTCCTTTTCCTGGCTCTCATTGTCTCAGCGTCTCTGTTCATTTTCTGCTCAATACTTTACTTTCTATACTATCTATGGTACTCTGTTGCACACAGGGCTAAAACGATACCGTTTGATGGAAATTCTCCATTGAAGCTCCAAAGATTTTCTTTCAGAGAGCTCAAGAAAGCCACCAATGGCTTTCACACTGAAAATGTTATTGGCAAAGGTGGGTCTAGTACAGTTTTTAAAGGGAAGCTTACAGATGGGAGTTTTATTGCTATTAAGCGTCTAGATGCTTTGTGTTTACAAACAGAGCAAGGGTTTCAGAATGAGCTTCAGATTCTTGGTACGTTAAGAACGTCCCCTTTCGTTGTCGCCCTTCTAGGATATTGTATGGAGAAGAACAAGAGAGCTTTGGCGTTTGAATATATGCCTAAGAGAAGCTTGCAGGAGTTTCTCTTTGGAGATAATGGCTGTTTGAGTTTAAGCTGGGAAAAGAGGTTTCTTGTAATATTGGATGTTGCTAAATCTTTGGAATTCCTTCACCTTGAATGTGACCCTCCTGTGATTCATGGGGATATTAAGCCAATCAATGTTCTACTTAATGAAGATTCTGTTGAGCATGTTAATGAAGTAGATTTTACTCTAGCTTTGCAGGCATCTTCTTCATCCAAGTATAGTAGTAAGGGGAAGGAAATCTCAAGTTTGGATATTGGTGGGGATGGTGATTGGAAGAACCAGTTTGTTCCTTGTGATGATGATTTTTCAGGCATTGATCATAGTAAAGAGTTAAATGTTAATGCTTTCTCAGCAGATGAAGAAAAGCCAAATGAAAAACAATGTGGAAATTCAGAAAAGAAGAACATTCCTGAGAAAACAGAACTGGAAAATTCAAGACCAACAGATAAACCAGATGATGCTGGCAATGGTGCTGATGAGAACAAAGAATCAGTGGAATAG 999 0.3894 MTSRSFPATPSHNLFTKYRVLFLALIVSASLFIFCSILYFLYYLWYSVAHRAKTIPFDGNSPLKLQRFSFRELKKATNGFHTENVIGKGGSSTVFKGKLTDGSFIAIKRLDALCLQTEQGFQNELQILGTLRTSPFVVALLGYCMEKNKRALAFEYMPKRSLQEFLFGDNGCLSLSWEKRFLVILDVAKSLEFLHLECDPPVIHGDIKPINVLLNEDSVEHVNEVDFTLALQASSSSKYSSKGKEISSLDIGGDGDWKNQFVPCDDDFSGIDHSKELNVNAFSADEEKPNEKQCGNSEKKNIPEKTELENSRPTDKPDDAGNGADENKESVE 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0539 332 Gene3D Transferase(Phosphotransferase) domain 1 157 251 - -
Lele38g0539 332 ProSiteProfiles Protein kinase domain profile. 80 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0539 332 Pfam Protein kinase domain 80 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0539 332 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Lele38g0539 332 SMART serkin_6 80 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0539 332 PANTHER OS07G0586332 PROTEIN 12 302 IPR044576 -
Lele38g0539 332 Gene3D Phosphorylase Kinase; domain 1 48 156 - -
Lele38g0539 332 ProSitePatterns Protein kinases ATP-binding region signature. 86 108 IPR017441 GO:0005524
Lele38g0539 332 SUPERFAMILY Protein kinase-like (PK-like) 60 235 IPR011009 -
Lele38g0539 332 MobiDBLite consensus disorder prediction 281 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0539 Lele-ChrLele38 4505873 4507132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0539 17 255 Receptor kinase-like Gene Family AT3G58690 35.271 1.93e-36 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Lele38g0539 Pkinase 3e-23 CL0016