Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0538 ATGAGGAACAACGAACATGATCGCCAGACCGGGATAGAAGACCAGGAACAGCGAAAATGGTTTCGGAAGGTTCAAAATCAGCCCAGGGATGATTTTATTGCTTCCCAGACTGTTACATTCAGCCACAAGCAGAGCACAGAGCTAGGAAGGTGGAAGGGTTCCGAACTTACCTTGCCGGAGCGGAGATATGACGGCAATAGGAGAGTTCTTGTCAAATTTGAATCTGACATGGATGGTCTCTTCTGTGAGCCATTTCCAAATTCATCATGGTTATTACCAGCTAGGGACTTTTCTCATCATCATTGGGAAGATGATCATGAAGATCATCGTGCTGTTCTTCACCTACGACACACCAATGATGATCATTATGACTTTTTCCACTGCATCTCTACTCAAGATCTTCTGCAGAATGTTCCAGTGTTGATTTTGCAGTCAAATCAGTACTTCACTCATTTGTCCATGGCAACTCAGAAGATTGGCCTCCAGATTAGAGTATTTGACACAAATAAACAACCCCATCAAGTTGTTCTCAACACAATATTATCTTGTACCTCAAAACACAATCTTTTGCCTAAACCAGATGAGAAAATATCAGTAACATCTTCTCAGCTGTTCTTGTCATTTCTTTATGAAGAACATCAAAACTCAAAAGATAATAACCAGAACATGAAGGCTTGGACTGAGTTGTATCAGCTGAGTTTGTGTGATGTGTTGATTACAAGTTCATTTTCTACTTTTGGGTATGTTGCTCAGAGCCTTGGAGGTTTGAAGCCATGGATTCTGAAGGGTACTTTCAGTGGAAAGGTTCCAGATCCTCCATGTGAAAAAGCCATGTCCATGGAGCCTCGTTTTCACTTTCCTCCTAAATGTGACTGTAGTTCCAATACTATTATCAATGTTACTTCTTTCTTTCCTCATACTAGGCACTGTGAATAG 936 0.4103 MRNNEHDRQTGIEDQEQRKWFRKVQNQPRDDFIASQTVTFSHKQSTELGRWKGSELTLPERRYDGNRRVLVKFESDMDGLFCEPFPNSSWLLPARDFSHHHWEDDHEDHRAVLHLRHTNDDHYDFFHCISTQDLLQNVPVLILQSNQYFTHLSMATQKIGLQIRVFDTNKQPHQVVLNTILSCTSKHNLLPKPDEKISVTSSQLFLSFLYEEHQNSKDNNQNMKAWTELYQLSLCDVLITSSFSTFGYVAQSLGGLKPWILKGTFSGKVPDPPCEKAMSMEPRFHFPPKCDCSSNTIINVTSFFPHTRHCE 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0538 311 PANTHER FUCOSYLTRANSFERASE 2-RELATED 66 150 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lele38g0538 311 Pfam Xyloglucan fucosyltransferase 152 195 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lele38g0538 311 Pfam Xyloglucan fucosyltransferase 66 98 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lele38g0538 311 Pfam Xyloglucan fucosyltransferase 209 292 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0538 Lele-ChrLele38 4499518 4503249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0538 66 311 Xyloglucan Fucosyltransferase1 AT2G03220 35.043 1.03e-47 166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0728 41 17222849 17224928 Lele38g0538 38 4499518 4503249 CCT
Lele42g0725 42 20300915 20304960 Lele38g0538 38 4499518 4503249 CCT
Lele38g0538 38 4499518 4503249 Lele39g0860 39 17530610 17533574 hybridization