Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0537 ATGAAGGTGTTCAAGATTAATGGAAGCAATCTTTCTCTTGCACTTTTCACTGATGTCACCAATTCAAAGGAGCTCTTAGAAAGTATGCAAGCTGCAACATTGGAACCAGAAGTTGCATTCCTCAATGCTTTACTTATCCCAGATATTTTCCCTGTTCTAGCTGCTGCGTACAAGACGCTCATTGCCAAGTCAAGGGATTCTTTGACAACACGCACACTTCATTCAGAGCTGGTTTTCAATTACTCAGGATCCAAGCATATTACAGAGTCATTGAAAAGATGCGGCATCTCTGATACCACAACCTACATCCTTGCTGCTCGATTCGATGCTACTCCTGAGGAGATGAAAGCAGTGGAGAAGTTAATTAATGGGAAAGAGGTTGACCTGGAACAGCTGGAAGCGAGAGCAAACCAATCCCAGATGCAAAAACATTACAAGATATCTGCACCAGAGCTTGGTGTATCATCACTTGCAGATGCGATCACTTGCCGTATAGCTGCTCGCGATGCCTTATATGGTTTATGGCAAGTGCAAATTGTGGTGGCCAACTATCTTCGTAAAGCAAAAAGTTTAGAGGTGTTAGCCACAAAAACAACACTATTGAGAGTGGTCATCCTCCAATATATTCCAAGATTTGCACGCTTTATCCCTTTAGCTACAGAAGGTAAGAAGACAGGTGCTGTTTTCTCTAATAATGCACTTGTTGGTGCCACCTACTATTTGGTTTGGTTCATGCTTGTTAGCCATGCTTCTGCTGATGCAGCTTCTCAAGGATGTTTTCCACATTTCTTGTACTGTGAGAGTTCAAATAGGCGCCATCCTGATGACCATGCTGTATCCTTCAGAAAAGCATATAATCACGAACTACAATCAATAACTGTTCGTCTTGAGGAAATGAGGATCAAAAGGCGTGATTCAGAGAAGTGGATGCATCACCGTGTGCTTCCTCAAGAGCTCAGGGAAAGAGTGAGACGCTATGATCAATACAAATGGATGGAAACTCGAGGAGTCGACGAAGAGACCTTGGTTCAGATTCTTCCTAAAGATCTAAGGAGGGATATCAAACGCCATCTTTGCTTGAATTTGGTTAGAAGAGTAAGTATACTCATAAATACCTTCATATTGGGATGCTTCAACTTCATCATCACAGTTCTGAACTTCTGTTTCTGA 1170 0.4214 MKVFKINGSNLSLALFTDVTNSKELLESMQAATLEPEVAFLNALLIPDIFPVLAAAYKTLIAKSRDSLTTRTLHSELVFNYSGSKHITESLKRCGISDTTTYILAARFDATPEEMKAVEKLINGKEVDLEQLEARANQSQMQKHYKISAPELGVSSLADAITCRIAARDALYGLWQVQIVVANYLRKAKSLEVLATKTTLLRVVILQYIPRFARFIPLATEGKKTGAVFSNNALVGATYYLVWFMLVSHASADAASQGCFPHFLYCESSNRRHPDDHAVSFRKAYNHELQSITVRLEEMRIKRRDSEKWMHHRVLPQELRERVRRYDQYKWMETRGVDEETLVQILPKDLRRDIKRHLCLNLVRRVSILINTFILGCFNFIITVLNFCF 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0537 389 FunFam Cyclic nucleotide-gated ion channel 1 295 359 - -
Lele38g0537 389 Gene3D Helix hairpin bin 295 359 - -
Lele38g0537 389 PANTHER CGI-121 FAMILY MEMBER 3 170 IPR013926 -
Lele38g0537 389 SUPERFAMILY PF0523-like 9 148 IPR036504 -
Lele38g0537 389 Coils Coil 115 142 - -
Lele38g0537 389 Coils Coil 282 302 - -
Lele38g0537 389 SUPERFAMILY cAMP-binding domain-like 298 369 IPR018490 -
Lele38g0537 389 Pfam Kinase binding protein CGI-121 16 169 IPR013926 -
Lele38g0537 389 Gene3D CGI121/TPRKB 1 171 IPR036504 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0537 Lele-ChrLele38 4492374 4499458 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0537 289 371 Ion Channels AT1G19780 85.542 8.73e-44 157