Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0536 ATGGACGAACGCTTGCTGGATGCAATTTATGAGCGTTTGAAGCCAAGTTTGTACACAGAGGGAACATATATTGTTAGGGAAGGAGATCCAGTAGTTGAGATGTTCTTCATGATACGTGGTCGTTTAGGGAGTGTGACCACAGATGGTGGAAGAAGTGGATTTTTCAACAGAGGTCTTCTCAAAGAAGTTGATTTCTGTGGAGAAGATCTTCTGACATGGGCATTAGACCCTAAATCTGCAGCAAACTTACCATCATCTACAAGAACAGTGAAAGCTATCAATGAAGTTGAAGCATTTGCTTTAGAAGCAGAGTTGTTGAAGTTTGTGGCTTCGCAGTTGAGGCGCCTCCATACCAGACAAGTTCAACAGACCTTCCGGTTCTACTGGCAGCAATGGAGAGCATGGGCAGCAACTTTCATTCAGGCTGCATGGCGCCAGTATACGAAAAGGAAGATGATAGGGGCGATGCTGATAGAGGAGGAGGAGGAAGATTATGGTTCTGAAGATGATGGAAAAGCTTTGATTTCAAGAACTGAAAGTTCATCAAGGACTGGACTTGGTTCAGCCTTTTATGCTTCTCGTTTCGCTGCTAAAGCTCTTCATGGTCGTAAGCTTCGTTTGCTCCAAAAGCCTCCAGAACCTGACTCCAGTGTTTATGATCATTAG 666 0.4429 MDERLLDAIYERLKPSLYTEGTYIVREGDPVVEMFFMIRGRLGSVTTDGGRSGFFNRGLLKEVDFCGEDLLTWALDPKSAANLPSSTRTVKAINEVEAFALEAELLKFVASQLRRLHTRQVQQTFRFYWQQWRAWAATFIQAAWRQYTKRKMIGAMLIEEEEEDYGSEDDGKALISRTESSSRTGLGSAFYASRFAAKALHGRKLRLLQKPPEPDSSVYDH 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0536 221 ProSiteProfiles IQ motif profile. 133 162 IPR000048 GO:0005515
Lele38g0536 221 FunFam Cyclic nucleotide-gated ion channel 1 1 113 - -
Lele38g0536 221 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 215 - -
Lele38g0536 221 Gene3D Jelly Rolls 1 115 IPR014710 -
Lele38g0536 221 CDD CAP_ED 1 128 IPR000595 -
Lele38g0536 221 SMART cnmp_10 1 128 IPR000595 -
Lele38g0536 221 ProSiteProfiles cAMP/cGMP binding motif profile. 1 80 IPR000595 -
Lele38g0536 221 SUPERFAMILY cAMP-binding domain-like 1 114 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0536 Lele-ChrLele38 4482200 4482865 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0536 1 215 Ion Channels AT1G15990 68.696 1.16e-95 293