Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0534 ATGGACAACCAACCAGACGAGACCCAGAAACAGACAGAAAAAACACAGGATCTTCAACAACAACAACAACGTAGTTCTTCTTCTTCTTCCCCACCTCCTCCTCCTCGTCTAGATCTCAGTCTCTCTAACTACTCCTCATCATCATCTGAATCTCCCCACCATGGCAGGATCTTCTCCTGCAACTACTGTCACAGAAAATTCTACAGCTTCCAGGCCCTTGGAGGACACCAAAACGCACACAAACGTGAGAGAACTCTTGCAAAAAGAGGACACAACAACAACGTTGGTGGTGGTCCGTCTTCTTCACATGTTTCTGCAGATTTTGGACTGAGGTATTATTATTCATGTATGGCTTCTCTTCCTTTGCATGGTTCTTCCTCCTCCTATAACAGGCCACTTGGGATTCAGCTTCATTCCATGATTCACAAGCCCTCTTCTTTTTCTTTTTCTTCTTCTTCTTTTCAACCACCTCGTTTCCAGAAGAAGAATCCATTATTCTTCGGAGCCTCCCATGTTTGGAGTACAGAAACTGAATTATCATCATCATCTTCTTTATTAACTTCTGGGATTCCAAAGTTTAATTCTCCAAGGCCTGTCACTGCAGAGGAGCTCCACAAACTTGACTTGTCCCTCAAACTGTGA 642 0.4377 MDNQPDETQKQTEKTQDLQQQQQRSSSSSSPPPPPRLDLSLSNYSSSSSESPHHGRIFSCNYCHRKFYSFQALGGHQNAHKRERTLAKRGHNNNVGGGPSSSHVSADFGLRYYYSCMASLPLHGSSSSYNRPLGIQLHSMIHKPSSFSFSSSSFQPPRFQKKNPLFFGASHVWSTETELSSSSSLLTSGIPKFNSPRPVTAEELHKLDLSLKL 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0534 213 Pfam C2H2-type zinc finger 58 82 - -
Lele38g0534 213 Gene3D Classic Zinc Finger 38 97 - -
Lele38g0534 213 SUPERFAMILY beta-beta-alpha zinc fingers 55 85 IPR036236 -
Lele38g0534 213 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 7 184 IPR044246 GO:0009788
Lele38g0534 213 ProSiteProfiles Zinc finger C2H2 type domain profile. 58 85 IPR013087 -
Lele38g0534 213 ProSitePatterns Zinc finger C2H2 type domain signature. 60 80 IPR013087 -
Lele38g0534 213 MobiDBLite consensus disorder prediction 1 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0534 Lele-ChrLele38 4470362 4471003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0534 56 213 C2H2 Transcription Factor Family AT1G80730 43.605 4.46e-28 104