Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0526 ATGTCCGGCCAAAGCCAGCGTCTTAATGTGGTTCCCACAGTCACAATGCTTGGAGTCATGAAGGCTCGCCTCGTCGGAGCCACGCGAGGCCATGCTCTTCTCAAGAAGAAGAGTGATGCTCTGACTGTACAGTTCCGTGCGATCCTCAAGAAGATTGTCTCCACCAAGGAATCAATGGGGGAGATCATGAAAACTTCTTCTTTTGCACTGACAGAAGTCAAGTACGTTGCTGGTGACAACATCAAGCACGTTGTGCTCGAGAATGTTCGAGTAGCTTCCCTGAAGGTTCGTTCTCGGCAAGAGAACGTCGCTGGTGTTAAGCTCCCCAAGTTTGAGTATTCAAATGATGGTGAATCTACTAAGAATGATCTTACTGGATTGGCAGGAGGTGGCCAACAAGTTCAGCAGTGTCGTGCTGCTTATATTAAGGCGATTGAAGTTCTTGTTGAGCTTGCATCACTTCAGACATCTTTCTTGACACTTGATGAGGCTATCAAGACGACAAATCGGAGAGTGAATGCCCTTGAAAATGTGGTTAAGCCCAGGTTGGAGAATACAATCAGCTATATTAAGGGAGAGTTGGATGAGCTAGAAAGAGAGGATTTCTTTAGGTTGAAGAAGATTCAAGGGTATAAGAAGAGAGAAATAGTGAGGCAGATGCAGATGGCCAAGCAATTTGCTGAGGAACAGGTTGCTGAGAAAATTGCATTACAGAAAGGAATTTCACTGAATTCAGCCCACAACTTGTTGTCTGCTGGAAATGAGAAAGACGAGGATATCATTTTCTAA 789 0.4499 MSGQSQRLNVVPTVTMLGVMKARLVGATRGHALLKKKSDALTVQFRAILKKIVSTKESMGEIMKTSSFALTEVKYVAGDNIKHVVLENVRVASLKVRSRQENVAGVKLPKFEYSNDGESTKNDLTGLAGGGQQVQQCRAAYIKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTISYIKGELDELEREDFFRLKKIQGYKKREIVRQMQMAKQFAEEQVAEKIALQKGISLNSAHNLLSAGNEKDEDIIF 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0526 262 Coils Coil 180 200 - -
Lele38g0526 262 Gene3D - 1 199 - -
Lele38g0526 262 TIGRFAM V_ATPase_subD: V-type ATPase, D subunit 9 213 IPR002699 GO:0046961
Lele38g0526 262 FunFam V-type proton ATPase subunit D 1 199 - -
Lele38g0526 262 Pfam ATP synthase subunit D 17 209 IPR002699 GO:0046961
Lele38g0526 262 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 1 262 IPR002699 GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0526 Lele-ChrLele38 4392832 4393620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0526 1 262 Primary Pumps ATPases(2) AT3G58730 82.061 8.22e-159 440