Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0522 ATGGACGAGTTTTTGGCGCTAATTTGCCCTAATACTCCATCTGTATGCATTTTTCGTCTTTTTCACCTCATTTTTGTATGGGATGGAAAGGGATTCTCAGAGTGTTTCGAAGATATATATCCTCATCTTCTTAATTTGATATCAGTTTCTGAATGGATTAAAAACTTACGTTTTTTATATATAAATTTCTTTTCCTTAATAACACCCACGGTTTTAGGTTTTGGACTGAATGCAGTGACTATTGTTATAATTGTTGTGATTGGATGCATTCACAAGAGCAGCCGAGGAATTCAAAGGTCAGACACGCAGATGGCCCTTTTGAAGAAGCTTTTCCTGCATCTTGTACCAGCTGTTGGAGCATGTGCTTCGTTGTTGGACATAATTTTTCTATGGAAGAGAGAAATTAACGGGAGCTTTGTTGGATATCATAAGTGGTCCTATAGCTGTTCTGAGTTGATGGTGTGGACAAATATCATTCTCTTCTCATGGTGTATCAGCAGTCATTACATGCTCTGCAACAATGTCTTGTGTTACTGGTGGATTCTGAAACCCCTTTTCTGGATCTTCCATTTGTTTACAAAGTTCCCATTGTTGGAGACTCCAATATGCGTTGTGGAATTCTTTATTCTTCTCCTGAATATCACATTTGGCATATCCATTAATGTCATAAGAATAAACATACTGTCTTCCAAAAACAGGTACATGCTGGCCAGTCTTTTTTACATGGTCACTTTCTTTCTGAGTTCATTTGAAGAGCCACTTCTTTCCAATGATATGGACCTTGAGGAAGGTTGCCATTGTGACCTCGGAAAATCTAGGAACTTTTGTGATTTGATGACTTTCAAATTCATAAATCCTGTAATGAACCATGGTGTGGTTAAACAACTGGACTTTGAAGATCTGCTGCAACTACCTGCAGATTTGGATCCTTCTTCCTGTCATGATGTAATTTTCATCTGCTGGCAAGAACAACTGAGCAATAATGGTTCAAACCCATCTTTACTTAGAGCAGTATGCTGTGCATATGGATGGCCATATCTCCGCCTGGGTTTATTGAAGGTGGTTAATGATTGTATTGGTTTTGCGGGACCATTGCTTCTTAATAAGCTGATCCGATTTCTTCAACAAGGTTCAGAGGGTTTGGATGGATATTTACTTGCTATATCCTTGGGCCTCACATCTGTAACTAACTGTGCTCAAGTAGTTTTTAATGCTATTTTTATGTTTATTTATCTTCTTGTATCCTTCTTATCCAGATCCTTCTTAGATACACAATATACTTTTCATCTTAGCAAGCTGAAGTTAAAGCTACGGTCTAGTATCATGACTCTAATATATCAGAAGTGTCTATGTGTGAACTTAGCAGAGCGTTCAAAATTCTCTAATGGAGAAATTCAGACATTTATGTCTGTGGATGCTGACCGAACTGTCAACATGTGTAATAGTTTCCATGATGTGTGGAGCTTGCCTTTACAAATTGGAGTGGCGCTATATCTTTTGTATACTCAAGTCAAATTTGCATTTGTATCTGGATTAGCAATTACCATTTTGTTGATACCAGTCAATAAATGGATATCAAAATTGATTGCAAATGCAACGGAGAAAATGATGAAGCAGAAGGATGAAAGGATACGGAGGACCGGGGAACTTTTGACTTATATTCGCACTTTGAAGATGCATGGATGGGAACTTCTTTTTTCTGGTTGGCTGATGGAGACAAGATCTTCTGAAGTGAAACACTTAGCTACTCGGAAGTACTTGGATGCATGGTGTGTATTCTTTTGGGCTACAACGCCAACTCTCTTTTCTCTTTTCACATTTGGACTCTATGCATTGATGGGGCACCAACTTGATGCTGCAATGGTTTTTACTTGTCTGGCTTTGTTCAACACATTAATTTCACCACTGAATTCATTCCCTTGGGTGATTAATGGATTGATTGATGCCTTTGTATCCTCGAGACGGTTGAGCAGGTTTCTTTCTTGTCCTGAAAATAAAGCTAAGGTGGAAGAGACCAATTCATGTTCCTTGCCATTCCATAGTGAACAGCCCGACTCTCTGCAAGGTTTAGCGGTCTTTGTCCAAGATGCATGTTGTACTTGGTCAAGCAGTGATGAAGAAGCATTAAATTTGGTGTTGAAGCATGTCAGTCTAAGCCTGTCAAGGGGTTCCTTTGTTGCAGTGATAGGAGAGGTTGGTTCAGGTAAATCATCGTTGTTATATTCGATTCTTGGAGAAACACGGGTGGTTCATGGATCAATTCACTCTGATGGAGCAGTGGCATATGTACCACAGGTCCCATGGATTTTATCTGGAACCATACGTGACAACATAATATTTGGGAAACCTTATGATCCCATAAGGTATGCAGAAACTGTTCAAGCATGTGCTCTAGATGTTGATATCTCATTAATGGTTGGAGGTGACATGGCTTACATTGGGGAAAAGGGAGTCAACTTATCTGGTGGACAGAGAACTCGTCTTGCTTTAGCCAGGACACTGTATCATGGCTCTGATGTGATTATGCTTGATGATGTCCTGAGTACAGTTGATGCACAAGTTGCTCGATGGATCTTACACAATGCCATTCTAGGTCCTCTTGTGCAGGGAAAAACTCGATTGCTTTGTACCCATAATATACAGGCAATATCCTCTGCTGATATGGTTGTTATAATGGACAAAGGACACATAAAGTGGGTGGGAAGTCCTAATGACCACCAAGTCTCTTCATATATAACATTCTCCCCATTGAATGAACTTGATTCGGATGTACAGAATCAAGGAAAACCTTGCTGCACAAATTCGTCTCCTGAATTAAAAGAGCTCCCAGGTAGAGAAATTAAACATGTTGTGGAGGGAGCAGAGGAGATCATTGAAGCTGAGTCGAGAAAAGAGGGAAAAGTGGAACTTGGAGTGTATAAGAACTACGCTATGTTCACTGGCTGGTTCATTACAGTTGTAATATGCATGTCAGCTGTTCTAATGCAAGCTTCTCGTAATGGAAATGATTTATGGCTGTCATTTTGGGTTGATACGGCAGAAAGCAGTCAAACAAGATACTCTCTGTCCTTTTATCTGGCTATACTGGCTCTCTTTTGCATCATAAATTCTTTTCTCACATTGGTGAGGGCGTTCTCTTTTGCATTTGGAGGCTTACAAGCAGCAATTAAAGTGCACAACAGAATGCTTGGCAATCTTATCAATGCACCTGTGCAATTCTTTGATCTGACCCCGGGTGGAAGAATACTCAACAGGTTTTCCTCGGATCTTTATACGATTGATGACTCCCTTCCATTCATTATGAACATTCTCCTAGCTAATTTGGTTGGCCTCTTGGGCATTGCAGTAGTTTTGTCATATGTTCAGGTCTTTTTCTTAATCCTGCTATTGCCGTTTTGGTATATCTACAGTAGACTCCAGTTCTTCTACAGGTCAACATCAAGAGAACTACGACGACTTGACAGTGTTTCTCGTTCTCCAATTTATACATCTTTCACTGAAACGCTTGATGGATCATCAACTATTCGGGCATTTAAATCTGAGGACTTATTTTTTTCCAAGTTCACTGAACATGTAACAATGTATCAGAAGACTTCTTACACAGAGATCGCAGCCAGTTTATGGCTTTCCTTACGTCTTCAATTATTAGCTGCATTCATCATCTCATTTATTGCACTGATGGCTGTGGTTGGAGGTCATGGCAGTCTGCCAATGAACTTTGGCACCCCTGGGCTGGTAGGATTGGCACTCTCATATGCGGCTCCAATAGTGTCCTTGTTGGGAAGCTTTTTAACAAGTTTCACTGAAACAGAAAAGGAAATGGTTTCAGTTGAAAGAGTCCTTGAATATATGGACATTCCTCAAGAAGAAATTGCTGGAGGCCTATGCATGAACCCAGATTGGCCAAATCAAGGAGTAATTGAGTTCCAAAATGTTACCTTAAAATACAAGCCATCTTTGCCACCTGCACTCTGCAATCTTAGTTTTACAATTGCTGGAGGGACCCAGATTGGAATTATTGGAAGAACAGGTGCTGGAAAGTCTAGTGTGTTGAATGCTCTTTTTCGCCTTACCCCGATATGTACAGGCTCTATTTTCGTTGATGGCATAAACATTAACAACATTCCTGTCAGAGAACTACGTTCCCGTTTGGCTGTTGTTCCTCAGAGTCCATTCCTCTTTGAAGGATCATTAAGGGATAATCTAGATCCCTTCCAAATGCATGACGACTTGAAAATTTGGAATGCTTTGGAGAAGTGCCATGTGAAAGAGGAAGTAGAAGCGGCTGGAGGGCTACATATTCTTGTAAAGGAATCTGGGATGTCTTTTTCAGTTGGCCAAAGGCAGCTTCTTTGCCTTGCACGTGCTCTTCTCAAATCTTCAAAGGTTCTCTGTTTGGATGAATGTACAGCCAACGTGGACACTCAAACTGCTTCACTCCTTCAGAGTACCATATCTGATGAATTCAAGGGCATAACAGTCATTACAATAGCTCACCGGATCTCGACAGTTATGAATATGGACAACATTTTAATTCTTGACCATGGGAACCTGGCTGAACAAGGAAACCCACTGGTTCTTCTGAAACATGACTCCTTATTCTCTAGTTTTACTAAAGCTTCATCAATGTAA 4632 0.4028 MDEFLALICPNTPSVCIFRLFHLIFVWDGKGFSECFEDIYPHLLNLISVSEWIKNLRFLYINFFSLITPTVLGFGLNAVTIVIIVVIGCIHKSSRGIQRSDTQMALLKKLFLHLVPAVGACASLLDIIFLWKREINGSFVGYHKWSYSCSELMVWTNIILFSWCISSHYMLCNNVLCYWWILKPLFWIFHLFTKFPLLETPICVVEFFILLLNITFGISINVIRINILSSKNRYMLASLFYMVTFFLSSFEEPLLSNDMDLEEGCHCDLGKSRNFCDLMTFKFINPVMNHGVVKQLDFEDLLQLPADLDPSSCHDVIFICWQEQLSNNGSNPSLLRAVCCAYGWPYLRLGLLKVVNDCIGFAGPLLLNKLIRFLQQGSEGLDGYLLAISLGLTSVTNCAQVVFNAIFMFIYLLVSFLSRSFLDTQYTFHLSKLKLKLRSSIMTLIYQKCLCVNLAERSKFSNGEIQTFMSVDADRTVNMCNSFHDVWSLPLQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWISKLIANATEKMMKQKDERIRRTGELLTYIRTLKMHGWELLFSGWLMETRSSEVKHLATRKYLDAWCVFFWATTPTLFSLFTFGLYALMGHQLDAAMVFTCLALFNTLISPLNSFPWVINGLIDAFVSSRRLSRFLSCPENKAKVEETNSCSLPFHSEQPDSLQGLAVFVQDACCTWSSSDEEALNLVLKHVSLSLSRGSFVAVIGEVGSGKSSLLYSILGETRVVHGSIHSDGAVAYVPQVPWILSGTIRDNIIFGKPYDPIRYAETVQACALDVDISLMVGGDMAYIGEKGVNLSGGQRTRLALARTLYHGSDVIMLDDVLSTVDAQVARWILHNAILGPLVQGKTRLLCTHNIQAISSADMVVIMDKGHIKWVGSPNDHQVSSYITFSPLNELDSDVQNQGKPCCTNSSPELKELPGREIKHVVEGAEEIIEAESRKEGKVELGVYKNYAMFTGWFITVVICMSAVLMQASRNGNDLWLSFWVDTAESSQTRYSLSFYLAILALFCIINSFLTLVRAFSFAFGGLQAAIKVHNRMLGNLINAPVQFFDLTPGGRILNRFSSDLYTIDDSLPFIMNILLANLVGLLGIAVVLSYVQVFFLILLLPFWYIYSRLQFFYRSTSRELRRLDSVSRSPIYTSFTETLDGSSTIRAFKSEDLFFSKFTEHVTMYQKTSYTEIAASLWLSLRLQLLAAFIISFIALMAVVGGHGSLPMNFGTPGLVGLALSYAAPIVSLLGSFLTSFTETEKEMVSVERVLEYMDIPQEEIAGGLCMNPDWPNQGVIEFQNVTLKYKPSLPPALCNLSFTIAGGTQIGIIGRTGAGKSSVLNALFRLTPICTGSIFVDGININNIPVRELRSRLAVVPQSPFLFEGSLRDNLDPFQMHDDLKIWNALEKCHVKEEVEAAGGLHILVKESGMSFSVGQRQLLCLARALLKSSKVLCLDECTANVDTQTASLLQSTISDEFKGITVITIAHRISTVMNMDNILILDHGNLAEQGNPLVLLKHDSLFSSFTKASSM 1543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0522 1543 FunFam ABC transporter C family member 5 951 1290 - -
Lele38g0522 1543 FunFam ATP-binding cassette (ABC) transporter, putative 1294 1540 - -
Lele38g0522 1543 SMART AAA_5 722 896 IPR003593 -
Lele38g0522 1543 SMART AAA_5 1333 1517 IPR003593 -
Lele38g0522 1543 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 272 1539 - -
Lele38g0522 1543 Gene3D ABC transporter type 1, transmembrane domain 322 666 IPR036640 GO:0005524|GO:0016020
Lele38g0522 1543 Gene3D ABC transporter type 1, transmembrane domain 950 1290 IPR036640 GO:0005524|GO:0016020
Lele38g0522 1543 Gene3D - 1295 1539 IPR027417 -
Lele38g0522 1543 FunFam ABC transporter C family member 13 673 928 - -
Lele38g0522 1543 CDD ABC_6TM_MRP7_D1_like 349 656 - -
Lele38g0522 1543 ProSitePatterns ABC transporters family signature. 820 834 IPR017871 GO:0005524|GO:0016887
Lele38g0522 1543 SUPERFAMILY ABC transporter transmembrane region 982 1289 IPR036640 GO:0005524|GO:0016020
Lele38g0522 1543 FunFam ATP-binding cassette subfamily C member 10 396 665 - -
Lele38g0522 1543 Pfam ABC transporter 1325 1471 IPR003439 GO:0005524
Lele38g0522 1543 CDD ABCC_MRP_domain2 1305 1524 - -
Lele38g0522 1543 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 708 905 IPR027417 -
Lele38g0522 1543 CDD ABCC_MRP_domain1 694 895 - -
Lele38g0522 1543 Gene3D - 679 922 IPR027417 -
Lele38g0522 1543 CDD ABC_6TM_MRP7_D2_like 985 1284 - -
Lele38g0522 1543 Pfam ABC transporter transmembrane region 987 1230 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele38g0522 1543 Pfam ABC transporter transmembrane region 350 636 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele38g0522 1543 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 986 1272 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele38g0522 1543 SUPERFAMILY ABC transporter transmembrane region 341 664 IPR036640 GO:0005524|GO:0016020
Lele38g0522 1543 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1301 1538 IPR027417 -
Lele38g0522 1543 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 351 648 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele38g0522 1543 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 692 919 IPR003439 GO:0005524
Lele38g0522 1543 Pfam ABC transporter 713 845 IPR003439 GO:0005524
Lele38g0522 1543 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1307 1540 IPR003439 GO:0005524
Lele38g0522 1543 ProSitePatterns ABC transporters family signature. 1443 1457 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0522 Lele-ChrLele38 4295275 4312223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0522 712 905 Calmodulin-binding Proteins AT2G36910 25.962 6.06e-18 88.6