Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0514 ATGAGTAATTTTCTTGTTATGTTCCTGCTCATTTGGGTATCAAGCTTTTCTCCTTCAGTTTCTCATTTTTTTGCAAATGCTCAAGCTGAATCTCCAGGTATTTCGGAGGTTAGAGTAGGGCACCACCAGAATTTGGACAAGAGAATTCTAATAGCACTTATTGTTTGCTCTGCTATTCTTGTCTCAATCTTCCTATTGTTAACCTATATCTGGTGTCATCGACACAAAATCTTCAAAGTTCCCAGTTCTAAAAGCCCCGAGACCATCGAAGCTGCAAAAGGGGTGTCACTTAGCCCTGTTGATGTTGAATTGAATTACTCAAAAATGGTAGACAAGAAGAGTTCAATTGCTATATTTGACTTTCAGTTGTTAGAGGTTGCAACAAACAGCTTTGACAAAAGTAATATTCTTGGTGAGAGTGGTTCTAGGCTAGTGTACAGAGCTTGTTTTGATGAGCATCTCAAGGCAGCTGTAAAGAAAGCAGATAGCAGTGCTGATAGAGAATTTGAGAATGAAGTGAATTGGTTAAGCAAGATTCGGCATCAGAACATCATTAAACTTCTTGGTTACTGTATTCATGGTGAATCAAGGTTTCTTGTATATGAAATGATGGAGAGCGGATATTTGGAAACTCAATTACATGGGCGTAGTCATGGATCATCTTTAAATTGGCACCTCCGGTTAAAGATTGCCGTTGATGTTGCCAGGGCATTAGAATATCTCCATGAGTACTCTAATCCTCCTGTGGTTCATGGAGACCTGAAATCTTCTAATGTTCTTCTGGATTCTCACTTTAATGCCAAGCTATCAGATTTTGGGCTTGCTGTAAGTTCTGGAATGCAAGACAAGAACATAAAGATGTCAGGAACTTTGGGTTATGTAGCACCTGAGTACATATCACATGGTAAGCTAACTGATAAGAGTGATGTATATGCTTTTGGGGTTGTCCTTCTAGAGCTTATAACAGGAAGAAAAGCCATGGACAAGATGTCCTCAGACCAATACCAATCCCTTGTCACATGGGCCATGCCTCAGCTAACTAGCAGATCAAAGCTTCCAAGTATTATAGATCCTGTAATCAGAAACACAATGGATTTGAAGCATTTATATCAGGTTGCTGCAGTGGCTGTACTTTGTGTACAACCAGAACCAAGTTATCGACCACTAATAACCGATGTCCTGCACTCTCTCATCCCTTTGGTACAGACGGAGCTGGGAGGGTCACTTAGAGTTTCAGAATCAGTCTGCTCTGAGGATTTGCAATGA 1266 0.4036 MSNFLVMFLLIWVSSFSPSVSHFFANAQAESPGISEVRVGHHQNLDKRILIALIVCSAILVSIFLLLTYIWCHRHKIFKVPSSKSPETIEAAKGVSLSPVDVELNYSKMVDKKSSIAIFDFQLLEVATNSFDKSNILGESGSRLVYRACFDEHLKAAVKKADSSADREFENEVNWLSKIRHQNIIKLLGYCIHGESRFLVYEMMESGYLETQLHGRSHGSSLNWHLRLKIAVDVARALEYLHEYSNPPVVHGDLKSSNVLLDSHFNAKLSDFGLAVSSGMQDKNIKMSGTLGYVAPEYISHGKLTDKSDVYAFGVVLLELITGRKAMDKMSSDQYQSLVTWAMPQLTSRSKLPSIIDPVIRNTMDLKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLIPLVQTELGGSLRVSESVCSEDLQ 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0514 421 SUPERFAMILY Protein kinase-like (PK-like) 110 397 IPR011009 -
Lele38g0514 421 Pfam Protein tyrosine and serine/threonine kinase 151 362 IPR001245 GO:0004672|GO:0006468
Lele38g0514 421 Gene3D Transferase(Phosphotransferase) domain 1 204 407 - -
Lele38g0514 421 FunFam probable receptor-like protein kinase At1g80640 204 402 - -
Lele38g0514 421 ProSiteProfiles Protein kinase domain profile. 131 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0514 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Lele38g0514 421 Gene3D Phosphorylase Kinase; domain 1 98 203 - -
Lele38g0514 421 PANTHER OS01G0750732 PROTEIN 31 402 - -
Lele38g0514 421 SMART serkin_6 131 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0514 Lele-ChrLele38 4221510 4224918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0514 10 343 Receptor kinase-like Gene Family AT1G80640 45.588 2.45e-97 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Lele38g0514 PK_Tyr_Ser-Thr 1.5e-41 CL0016