Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0506 ATGAAGACAACCTTCAATTTTACTAATTTGTGTGCACGAGACACAGCTCTGCAAAATTCAGTTCAATCTTATCATCAGGACATGACAGAAATAAAGAAAGCTTGCATACCTGCCCCTTTAATTCATGGAGAATTCAATCTTTCTTCTTCATCTGAATTCCCAACCTTATTATTAATGGAGGTTCCATGGCAGAATTGGTTCTCCGATCTGGACATGGATGAGATCGATTTCTTCAATCAATCACACAAGACTTATTCTTTTGATGATGATGAAGAGTTTCTTAGGGAGATCTTTCGCCAACCTTCTTTCTCTTCTGAGAGTGACAGTACTCATTCTTCCTCTATTCAAAACAATGCCGTCACCGCCCCATCAGATGGTGCCGCCGCTAGGGCTACGACCCCCACCGTTAGCAGCTTATCTTTGGATAATAAAGACTCCGGCGCCGGCAGCCAGCTGAAACGTAACAGCTCGTGCTCGAGCTCCCTCGTCTCGAAACTTGGAAACTTCTCGGATAAACCTGCAGTAGTGGCCACATCGTCGTCTCCGTCAACTTATATTCTGTCTTTCGATAACTCAACAGTACTACCAGCCACCTCCGATGTCGACGGTTACCGGAAACATGATGAATCCACCATGAAGAGTGGTAATCAAGAGAAATTAGAGAGTAGTACAGGAGGAGGAGGAGGCACACGAACTTCTCAAAAACGAACCCTAGAAAACCATAATAGCGATCATCAGCCAAAAGCTAATCAAGGGACAAAGAAGACTAGAAGTTCATCTGAGTCATTGGATCACATAATGGCGGAGAGAAAAAGGAGACAAGAACTCACCGAGAAGTTCATTGCACTCTCTGCTACAATTCCTGGTCTCAAGAAGATTGACAAGGCTTCTATACTAAGCGAAGCTACCATTCACGTGAAGCAACTTAAAGAGCGAGTGAAAGAGTTAGAGGAACAGAACAAGAAGATGAGTAATAATGTGGAGTCAGTGTCGTACATGAAGAAGAAGAAGAAGAAGTCGTCGTTTTCATCATCGAGCAAAGATAATATTGAAGACACAACGTCTTGTGAAATAATGAGCTCTGACGATTACTTTAAAATTAGTGAATCACTTCCTGAAGTTGAAGCAAGAGTTTTACAGAGGCAAGTTCTCATCAGAATCCACTGCGAGAATCAAAAAGGAGTTATTATCAACTTATTGGCTCAGCTCCACACTCTTCATTTCTCCATAATCAGTCACAGTGTGTTGCCATTTGGAAATTCCACTCTTGATATTACCATTATTGCTGAGGTTGAAGAGGAACACAACATAGCAGTGAAGGAACTTGTGAAAAAGCTGAGAACGATTCTGTTGAAGTCAGCTGACTGA 1368 0.4218 MKTTFNFTNLCARDTALQNSVQSYHQDMTEIKKACIPAPLIHGEFNLSSSSEFPTLLLMEVPWQNWFSDLDMDEIDFFNQSHKTYSFDDDEEFLREIFRQPSFSSESDSTHSSSIQNNAVTAPSDGAAARATTPTVSSLSLDNKDSGAGSQLKRNSSCSSSLVSKLGNFSDKPAVVATSSSPSTYILSFDNSTVLPATSDVDGYRKHDESTMKSGNQEKLESSTGGGGGTRTSQKRTLENHNSDHQPKANQGTKKTRSSSESLDHIMAERKRRQELTEKFIALSATIPGLKKIDKASILSEATIHVKQLKERVKELEEQNKKMSNNVESVSYMKKKKKKSSFSSSSKDNIEDTTSCEIMSSDDYFKISESLPEVEARVLQRQVLIRIHCENQKGVIINLLAQLHTLHFSIISHSVLPFGNSTLDITIIAEVEEEHNIAVKELVKKLRTILLKSAD 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0506 455 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 264 327 IPR036638 GO:0046983
Lele38g0506 455 Pfam Helix-loop-helix DNA-binding domain 265 310 IPR011598 GO:0046983
Lele38g0506 455 MobiDBLite consensus disorder prediction 237 251 - -
Lele38g0506 455 ProSiteProfiles ACT domain profile. 384 455 IPR002912 -
Lele38g0506 455 Coils Coil 299 333 - -
Lele38g0506 455 MobiDBLite consensus disorder prediction 201 215 - -
Lele38g0506 455 MobiDBLite consensus disorder prediction 196 264 - -
Lele38g0506 455 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 260 309 IPR011598 GO:0046983
Lele38g0506 455 PANTHER BHLH TRANSCRIPTION FACTOR 98 452 - -
Lele38g0506 455 SMART finulus 266 315 IPR011598 GO:0046983
Lele38g0506 455 Gene3D - 259 337 IPR036638 GO:0046983
Lele38g0506 455 MobiDBLite consensus disorder prediction 216 236 - -
Lele38g0506 455 MobiDBLite consensus disorder prediction 103 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0506 Lele-ChrLele38 4153861 4157237 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0506 251 450 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 44.498 1.77e-43 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele38g0506 HLH 3.8e-07 No_clan