Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0504 ATGATGCAGGACATGGATGATACTGAAGACTTCCACGATCAGTTTTGTCACATGATGATGTCTTTTGATGAGGAAGACGAAGAGTTTCTCAGAAACATTCTTCAGCAGCAGCCAGCTGGTGGAAATAGGAATAATGAGTTGTCTTCTTCTTCTCAAAGCGAAGAAGATAAATCCTCTCCCACCGTAGATTTCTCTACCGACGGCTCGGGCAACCGTGGTGGTGGTTCGAATGTTGACAACAAAAACCGTGTGATGTCTGCTAAATCATACATTTTATCATTTGATAAATCCAACGTAATACCAGCAGAAGAAACAATCTCAAAAAACGAAGAATCTAGTACCTCTGAACTTTGTTCATTAAAAAGGATAAGAGAGACATGTAACAATGTTGAGCCTAGAAAGAAGACTAGAAGCTGTTCAGAGACTGCAAACCACATAATGGCAGAGAGGAGGAGAAGGCAGCAGCTCACAGAGAGATTTATTGCACTTTCGGCAACTATTCCGGGCTTGAAGAAGATGGACAAAGCTACAATTCTTCAAGAAGCGACGAAATACGTGAAGCAGCTTCAAGAACGAGTAACAGAGCTAGAGAAACAAAATATTGTAAACAACACTACAACATTGGACTCATCAATGATATCGATCAAGAAATGTGAGCTACACAGAATTAATGATGATTTGTGTTGTGAAGCAAATGATCAAGTGTTGCCTCAGATTGATGCAAAAGTGTTGGAGAATCAAGTGCTGTTTGGAATCTATTGTGAAAAGCAAAAGGGCATCGAGTTTAAAATATTGACTTTGCTTGAGAATTTTCATCTTCATGTCACTAGTAGCAGCGTCTTGCCATTTGGGAATTCCACTCTTGGCATCACCATCATTGCCCAGATGGGGGAGGAATACAGAATGACAGTGAATGAAGTGATGAAAAACCTACGACAAGTTCTGTCAAAGCCGCACGATGCTGATCCGTACTAG 975 0.4072 MMQDMDDTEDFHDQFCHMMMSFDEEDEEFLRNILQQQPAGGNRNNELSSSSQSEEDKSSPTVDFSTDGSGNRGGGSNVDNKNRVMSAKSYILSFDKSNVIPAEETISKNEESSTSELCSLKRIRETCNNVEPRKKTRSCSETANHIMAERRRRQQLTERFIALSATIPGLKKMDKATILQEATKYVKQLQERVTELEKQNIVNNTTTLDSSMISIKKCELHRINDDLCCEANDQVLPQIDAKVLENQVLFGIYCEKQKGIEFKILTLLENFHLHVTSSSVLPFGNSTLGITIIAQMGEEYRMTVNEVMKNLRQVLSKPHDADPY 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0504 324 Coils Coil 179 199 - -
Lele38g0504 324 MobiDBLite consensus disorder prediction 34 81 - -
Lele38g0504 324 PANTHER BHLH TRANSCRIPTION FACTOR 17 316 - -
Lele38g0504 324 SMART finulus 146 195 IPR011598 GO:0046983
Lele38g0504 324 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 140 189 IPR011598 GO:0046983
Lele38g0504 324 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 143 200 IPR036638 GO:0046983
Lele38g0504 324 Gene3D - 139 210 IPR036638 GO:0046983
Lele38g0504 324 Pfam Helix-loop-helix DNA-binding domain 143 190 IPR011598 GO:0046983
Lele38g0504 324 MobiDBLite consensus disorder prediction 35 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0504 Lele-ChrLele38 4135492 4137862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0504 124 316 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 41.429 5.67e-44 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele38g0504 HLH 2.8e-11 No_clan