Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0482 ATGGCCGAAGTTTCTCTCAACAGTGAGCCAGTAGTAGATGATGATGCTGATGGATTTGAGATTGAAGGGGATTGTGGAATGGCAGATTTTGTCAGTCAAACTGGCATAATCCAAGGGGAGAACCCACTTCCTCCTGCTGTTGGAATGGAATTTCAGACTTATGAGGATGTATATTATTTCTACAATTGCTACGCCAAGGATCAAGGATTCGGGGTTCGAGTAAGTAATACTTGGTATAGGAAGAGCAAGGAACGGTACAGAGGAAAACTCAGCTGCAGTAGTGCTGGGTTCAAGAAAAAAAGTGAAGCGAATCGCCCGAGACCTGAAACAAGAACTGGTTGTCCAGCGATGATAAAGTTCAGGCTGATGGATTCCAAAAGATGGAGAATTATAGAAGTGGAGCTTGAGCATAATCACTTGATAAACCCAACGAGTGGAAAGTTCTACAAATCTCATAAGCGCCTGGGTTTGGGGACCAAAAGAGCGTTGCAATTAGACAGTACTGAAGAAGTTCAGAAGATTAGACTATTTCGAACTGTGATTATTGATGGCGAGACTAATGGAAGTTTAGATGTTGATGAAGGACAACCCAAAAGCAAAGCTGTATGGTCCAATCAATTGAAGCTAAATAAAGAAAAACTGGGGGGATCGCTAGAATATGAGGCAGTGAAAGCAGCAATTAGTAAAGCAGTTTATTACTCCCTGAGGACTGAGGAATTCGATGAAGCTTGGGAGGACATGATGCAGCAATTCGAAATTCGAGGTCATGAGTGGCTTCAAGCATTATACGAGGACAGAAAACGGTGGGTTCCAGCATATGTCTCAAAATTGTACACAAATGAACTATTCAGAATGTTTGAAAGGGAAATAAAAGGAATGTACTCCTGTTTAAGCACCAGACAGATAAATGTGGATGGACCAGTAATCTCATACCTCATCAAAGAACAAGTTGAAGTTGAAGGAAATCAGAGAGTTACAAGAGATTATGAAGTGTATTACAATGGGTCTGAAAAGGAGATCCTTTGCATTTGTGGTTTGTTCAACTTCAAAGGAATCTTGTGTAGGCATGCATTATCTGTCTTAAACCAGAATGGTATAGAAGAGATTCCAGCTCAGTATATTCTCTCAAGATGGAGAAAAGATCTGAAGCGAAGTTATGTTATTGATCAGAAATCTAGTGGCATTGATATTAATAACCCAGTTCATAGGTATGATCATTTATATAGACGAATAGTGCAGGTTGTGGAGGAAGGTACGAAATCGCATGACCGTTTCAGGATTGCTATGCAAGCATTCAATGAGATATTGAATAAACTTAAATGTGTAAATTTAGAGGATCATTCAATATAG 1350 0.3978 MAEVSLNSEPVVDDDADGFEIEGDCGMADFVSQTGIIQGENPLPPAVGMEFQTYEDVYYFYNCYAKDQGFGVRVSNTWYRKSKERYRGKLSCSSAGFKKKSEANRPRPETRTGCPAMIKFRLMDSKRWRIIEVELEHNHLINPTSGKFYKSHKRLGLGTKRALQLDSTEEVQKIRLFRTVIIDGETNGSLDVDEGQPKSKAVWSNQLKLNKEKLGGSLEYEAVKAAISKAVYYSLRTEEFDEAWEDMMQQFEIRGHEWLQALYEDRKRWVPAYVSKLYTNELFRMFEREIKGMYSCLSTRQINVDGPVISYLIKEQVEVEGNQRVTRDYEVYYNGSEKEILCICGLFNFKGILCRHALSVLNQNGIEEIPAQYILSRWRKDLKRSYVIDQKSSGIDINNPVHRYDHLYRRIVQVVEEGTKSHDRFRIAMQAFNEILNKLKCVNLEDHSI 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0482 449 ProSiteProfiles Zinc finger SWIM-type profile. 329 365 IPR007527 GO:0008270
Lele38g0482 449 Pfam FAR1 DNA-binding domain 60 142 IPR004330 -
Lele38g0482 449 Pfam SWIM zinc finger 329 362 IPR007527 GO:0008270
Lele38g0482 449 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 39 274 IPR031052 GO:0006355
Lele38g0482 449 SMART 26again6 340 367 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0482 Lele-ChrLele38 3867212 3869233 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lele38g0482 FAR1 2.5e-21 CL0274