Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0473 ATGGGTATGACTTTTTGCCCAATATTTTTTTGTGCAAAGGGTTTAGATCGAGAAGCACGAAGTAAGAAAGTGTCTAAATGGAGAGTCTTTTCTTTGAAGGAACTACACTCAGCAACAAATAATTTTAACTATGATAACAAGCTTGGAGAAGGGGGATTTGGCAGTGTATACTGGGGCCATCTTTGGGATGGATCACAAATTGCAGTGAAGAGATTAAAAGTTTGGAGCAACAAAGCAGATATGGAATTTGCTGCTGAAGTTGAGATATTGGCCAGAGTAAGACACAAGAATCTTCTTAGTCTACGCGGCTATTGCGCGGAAGGGCAGGAAAGACTAATTGTATATGATTATATGCCAAATTTGAGCCTACTCTCTCATCTTCATAGGCAGCACTCTGCAGATGGCCTTCTTAATTGGAACAGGCGCATGAATATCGCAATTGGGTCGGCTGAGGGAATAGTATATCTTCACCACCAAGCAACACCCCACATAATCCACAGGGATATCAAATCAAGCAATGTGCTATTGGATGCAGATTTCCACGCTCGGGTTGCCGATTTCGGTTTTGCTAAGTTGATTCCTGATGGGGCAACCCATGTGACCACGAGAGTTAAGGGAACCCTTGGCTACCTCGCGCCGGAATATGCTATGCTCGGTAAGGCATCTGAGAGTTGTGACGTCTATAGTTTTGGAATTCTCCTGCTAGAACTTGCAAGTGGCAAGAAACCAATTGAAAAACTAAGCACTTCGATGAAGCGATCGATAGCTGATTGGGCTCTACCATTGGTTATTGAGAAGAGATTTAGTCAACTAGCAGATCCAAAGCTAAAGGGTAAGTATGCGGAGGAAGAACTTAGAAGAATGATTCTTGTTGCACTTGTATGTGCTCAAAGTCAGCCTGAGAAGAGACCCACCATGCTCGAGGTGGTAGAGCTGCTTAAGGGAGAATCTAAGGATAAGTTATCCGAGTTAGAAAAGAATGAATTGTTCAGAAACCCTCCAGCTTTAGAAAACAGTGATGGGGCATCAGCTGCTGAAGATAGCTCAGACTTCATCTCAGAAGAGAAGGAATCAACATTTGAGATGAAAGAGAGTAGTGAGCTATAG 1107 0.43 MGMTFCPIFFCAKGLDREARSKKVSKWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGHLWDGSQIAVKRLKVWSNKADMEFAAEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHRQHSADGLLNWNRRMNIAIGSAEGIVYLHHQATPHIIHRDIKSSNVLLDADFHARVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKLSTSMKRSIADWALPLVIEKRFSQLADPKLKGKYAEEELRRMILVALVCAQSQPEKRPTMLEVVELLKGESKDKLSELEKNELFRNPPALENSDGASAAEDSSDFISEEKESTFEMKESSEL 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0473 368 MobiDBLite consensus disorder prediction 323 368 - -
Lele38g0473 368 Coils Coil 307 327 - -
Lele38g0473 368 PANTHER OS01G0253100 PROTEIN 23 319 IPR045271 -
Lele38g0473 368 SUPERFAMILY Protein kinase-like (PK-like) 23 313 IPR011009 -
Lele38g0473 368 SMART serkin_6 42 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0473 368 Gene3D Transferase(Phosphotransferase) domain 1 118 331 - -
Lele38g0473 368 FunFam PTI1-like tyrosine-protein kinase At3g15890 14 117 - -
Lele38g0473 368 Gene3D Phosphorylase Kinase; domain 1 13 117 - -
Lele38g0473 368 CDD STKc_IRAK 48 315 - -
Lele38g0473 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Lele38g0473 368 FunFam PTI1-like tyrosine-protein kinase At3g15890 118 329 - -
Lele38g0473 368 ProSiteProfiles Protein kinase domain profile. 42 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0473 368 ProSitePatterns Protein kinases ATP-binding region signature. 48 70 IPR017441 GO:0005524
Lele38g0473 368 MobiDBLite consensus disorder prediction 349 368 - -
Lele38g0473 368 Pfam Protein kinase domain 43 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0473 Lele-ChrLele38 3812898 3815829 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0473 30 316 Trihelix Transcription Factor Family AT1G70460 51.203 2.16e-93 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Lele38g0473 Pkinase 2.9e-45 CL0016