Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0472 ATGGCTTTTTGCTCACTATCTTTCTGTGCAAAGGGTTTGGATCGAAGAGCAAGAAGGAAGAAAGTACCTAAATTGAAAGAATTAGTCTCAGCTACAAATAATTTTAACTATGATAACAAGCTTGAAGAAGCTGAATTTTGCAGTGTCTACTGGGGCCAGCTTTGGGATGGATCGCAAATTGCGATTAAGAGACTGAAAGTTGGGAGCAACAAGGCAGAATCAGAATTTGCCGTTGAAGTTGAAATATTGGCAAGGGCACAACACAAGAATCTTGTTAGCCTACGTGGATATTGTGCTGAGGGGCAAGAAAGGCTAATTGTATTTGACTATATGCCTAATTTGAGCCTCTTCTCTCATCTTCATGGACAACACCCTGAAGAATACCTTCTTGATTGGAACAAACGGAAGAATATCGCAATTGGGTCATCCGAGGGCATTGCATATCTTCACCACCAAGCAACACCACGAGTAATCCATAGAGACATCAAAGCAAACAATGTGCTACTTGATGCAGATTTTCATGCTCGGATTGCGGGTTTTGAATTTGCTAAGTTGATCCCTGATGGGGCAACCCATATAAGCACCACGATTAAAGGAACACTAGGCTACCTCGCGCCGGAATATGCCTTGCTTGGTAAGACATCTGAGAGTTGTGATGTCTACGGTTTTGGGATTCTCTTGCTGGAACTCGTTAGTGGCAAGAGACCAATTGTAAAACTGAGTGCCACAACGAAGCAATCGATATTTGATTGGGCACTTCCTTTGGCTTGTGAGAAGAAATTTAGTGAACTTGCAGATTCCAAGCTAAAGGGAAATTTTGTGGAGGAAGAACTTAAAAGAGTGATTCTTGTTGGACTTGTATGTGCTCAAATTCAGCATGAGAAGAGACCCACCATGTTTGAAGTGGTAGAGCTGCTTAAGGGAGAATCTAAGAACAAGTTATCTCAATTAGAAAACAGTGAATTGTTCAGAAATCCTCCAGCTTTAGAAAACAAAGACGGCGCATTAGTTGCAGACAACAGTTCTGACTTTGTCATAGAGGAGAAGGAAATATTTTAA 1059 0.4127 MAFCSLSFCAKGLDRRARRKKVPKLKELVSATNNFNYDNKLEEAEFCSVYWGQLWDGSQIAIKRLKVGSNKAESEFAVEVEILARAQHKNLVSLRGYCAEGQERLIVFDYMPNLSLFSHLHGQHPEEYLLDWNKRKNIAIGSSEGIAYLHHQATPRVIHRDIKANNVLLDADFHARIAGFEFAKLIPDGATHISTTIKGTLGYLAPEYALLGKTSESCDVYGFGILLLELVSGKRPIVKLSATTKQSIFDWALPLACEKKFSELADSKLKGNFVEEELKRVILVGLVCAQIQHEKRPTMFEVVELLKGESKNKLSQLENSELFRNPPALENKDGALVADNSSDFVIEEKEIF 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0472 352 SMART serkin_6 35 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0472 352 SUPERFAMILY Protein kinase-like (PK-like) 21 306 IPR011009 -
Lele38g0472 352 PIRSF ILK 10 319 - -
Lele38g0472 352 Pfam Protein kinase domain 43 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0472 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Lele38g0472 352 Gene3D Phosphorylase Kinase; domain 1 10 110 - -
Lele38g0472 352 ProSiteProfiles Protein kinase domain profile. 35 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0472 352 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 19 322 - -
Lele38g0472 352 Gene3D Transferase(Phosphotransferase) domain 1 111 324 - -
Lele38g0472 352 FunFam PTI1-like tyrosine-protein kinase At3g15890 111 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0472 Lele-ChrLele38 3805082 3807913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0472 26 319 Trihelix Transcription Factor Family AT1G70460 44.295 6.42e-82 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Lele38g0472 Pkinase 6.6e-38 CL0016