Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0444 ATGTTGGGAACATTCTATGCAGCTGAAGTGCTTCTAGCTCTTGAATATCTGCACATGATGGGGATAATTTACAGAGACCTAAAGCCAGAGAATGTTCTTATTCAAGAAGATGGCCACATCATGCTCTCCGACTTCGATCTCTCACTTCTTCACTGCGAGGCTCATCCCAAGCTTCTGAAACACGACATTACTGCAACAACGAACAAGAAGAAGAAGCATGCAACTTTCTGTTGTACTGAAAACTCAGTGGAAGATGGTGTCATAATCAGAAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAAGCATCCTCCATAGCTGATGATGACGTGGAACTATCGGCAGAACCAATGAACGCAAGATCCAACTCATTTGTTGGGACCCACGAGTATTTAGCACCAGAGATGATATTAGGATACAAAGAAGATGACGATGATGAGGAAGAAGAGATAGAGAAGGCACAAGATCTCATAAAACAGCTTCTGGTGAAGAATCCTAAGAAGAGACTTGGATCTACGAGAGGATCTTGTGAGATTAAGAGACATGAATTCTTCGAAGGCACGAACTGGGCCTTAATTAGATCGAATAAACCATCCGTTGTCCCTAAACAAGATGTATCAGTATTAGCAGACTTGGTCAAGGACAAAGCTACAGAACAGAACCCTCAGAAAATTTATTTCTTCTGA 684 0.4211 MLGTFYAAEVLLALEYLHMMGIIYRDLKPENVLIQEDGHIMLSDFDLSLLHCEAHPKLLKHDITATTNKKKKHATFCCTENSVEDGVIIRRRRRRKKKKKKASSIADDDVELSAEPMNARSNSFVGTHEYLAPEMILGYKEDDDDEEEEIEKAQDLIKQLLVKNPKKRLGSTRGSCEIKRHEFFEGTNWALIRSNKPSVVPKQDVSVLADLVKDKATEQNPQKIYFF 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0444 227 Coils Coil 143 163 - -
Lele38g0444 227 Pfam Protein kinase domain 5 50 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0444 227 SUPERFAMILY Protein kinase-like (PK-like) 5 211 IPR011009 -
Lele38g0444 227 FunFam Serine/threonine-protein kinase OXI1 2 53 - -
Lele38g0444 227 ProSitePatterns Serine/Threonine protein kinases active-site signature. 22 34 IPR008271 GO:0004672|GO:0006468
Lele38g0444 227 Gene3D Phosphorylase Kinase; domain 1 202 221 - -
Lele38g0444 227 SMART serkin_6 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0444 227 ProSiteProfiles Protein kinase domain profile. 1 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0444 227 Gene3D Transferase(Phosphotransferase) domain 1 151 201 - -
Lele38g0444 227 Gene3D Transferase(Phosphotransferase) domain 1 4 142 - -
Lele38g0444 227 PANTHER FLIPPASE KINASE 1-RELATED 150 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0444 Lele-ChrLele38 3611285 3612935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0444 5 206 AGC Kinase Gene Family AT2G26700 40.203 2.01e-57 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele38g0444 Pkinase 2.4e-15 CL0016