Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0441 ATGGAAATCCAGGGACATCCCCATTCTTCATCTTCTTCATTGCAAATACCTAGCTGGGGTTGCTTCCAACACTTTAAAAGAGGCAAAATGAGCCATGCACATTCTCAAATGGGCTCTGGTAGTAGAACTGCTAGAAGAAGTTTTGAGTTTGGGAAGACGCATGTGGTGAGGCCCAAAGGAAAACACCAAGCTACTATTGTCTGGCTGCATGGTCTTGGTGATAATGGTTTGAGCTCATCTCAACTCCTGGAATCCCTTCCACTCCCAAATATAAAATGGATTTGCCCTACTGCTCCGACCCGTCCTGTAGCAATCCTTGGCGGTTTTCCTTGCACTGCATGGTTTGACGTTGGAGAACTCTCAGAGGAAGGTCCAGATGATTGGGAGGGCTTAGATGCCTCAGCTGCACATATTGCCAACCTGTTGTCAACAGAGCCAGCTGATGTGAAAGTTGGGATTGGAGGCTTCAGCATGGGTGCAGCAACAGCCTTGTATTCTGCTACTTGTTTTGCTATGGGTAGGTATTCAAATGGAATACCGTATCCTCTTAACATTAGAGCAGTTGTTGGACTAAGTGGCTGGCTTCCAGGATCAAGGAGCCTAAGGAACAGGATTGAAGTGTCACATGAGGCCAGAAGGCGAGCTGCTTCATTACCCATTTTGCTGTGCCATGGAAACAATGATGATGTAGTCCTGTACAAATATGGAGAGAAATCAGCCCAATGCCTAAGTTCAGCCGGATTTCGATACATTACATTCAAGTGCTATGATGGTCTTGGCCATTACACAGTTCCTAGAGAGATGGATGAAGTCTGTAATTGGCTTAACTCAAGGCTTGGGCTTGATGGAACCTCATAA 858 0.4604 MEIQGHPHSSSSSLQIPSWGCFQHFKRGKMSHAHSQMGSGSRTARRSFEFGKTHVVRPKGKHQATIVWLHGLGDNGLSSSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSEEGPDDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAATALYSATCFAMGRYSNGIPYPLNIRAVVGLSGWLPGSRSLRNRIEVSHEARRRAASLPILLCHGNNDDVVLYKYGEKSAQCLSSAGFRYITFKCYDGLGHYTVPREMDEVCNWLNSRLGLDGTS 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0441 285 Pfam Phospholipase/Carboxylesterase 53 276 IPR003140 GO:0016787
Lele38g0441 285 SUPERFAMILY alpha/beta-Hydrolases 54 279 IPR029058 -
Lele38g0441 285 Gene3D alpha/beta hydrolase 44 280 IPR029058 -
Lele38g0441 285 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 19 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0441 Lele-ChrLele38 3591895 3595440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0441 30 283 Acyl Lipid Metabolism Gene Families AT5G20060 66.142 3.63e-130 368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0807 42 20968286 20981595 Lele38g0441 38 3591895 3595440 CCT
Lele38g0441 38 3591895 3595440 Lele41g0797 41 17728328 17731481 CCT
Lele38g0441 38 3591895 3595440 Lele42g0786 42 20811183 20815091 CCT
Lele38g0441 38 3591895 3595440 Lele43g0603 43 5392513 5395573 CCT
Lele38g0441 38 3591895 3595440 Lele44g0557 44 4344107 4347383 CCT
Lele37g0473 37 3908776 3911617 Lele38g0441 38 3591895 3595440 ECH
Lele38g0441 38 3591895 3595440 Lele38g0441 38 3591895 3595440 ECH
Lele38g0441 38 3591895 3595440 Lele39g0953 39 18377264 18380997 hybridization
Lele38g0441 38 3591895 3595440 Lele40g0415 40 3418491 3421283 hybridization