Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0414 ATGGCTCTCGGACTTGAAATCACAGAGCTTAGGTTGGGTCTTCCCGGCGGTGGGGATGATCAGAACAAGAGTAATGAGGTGACCAAGAAGAGGGTGTTCTTGGATATTGGCCGTGTTGATGGAGGTGGTGGTAGTGGTGAGGATGAGAATAGCTGCGCTGGCGATCGGAAAACACCCTCGAAGAGCGCTGTGGTGGGGTGGCCGCCTGTGGGATCATACCGGAGGAGAAACAGCATGAGTGAAGGGTCGAAGGAGAAAATTTACGTGAAGGTTAGTATGGATGGAGCTCCTTTCTTGCGAAAAGTTGATTTGGGAATGCAAAAGGGCTACTCTGAGTTAGTATCAGCCTTGGAGAAGCTCTTTGATTGCCACGGAATCGGAGAGGCATTGAAGGGAGTGGACAATTCTGAAGTCGTTCCCATTTATGAGGACAGAGATGGTGACTGGATGCTTGTTGGAGATGTCCCTTGGGAAATGTTTATAGAGTCATGCAAGAGGCTGAGGATTATGAAGAGATCGGAGGCAAAAGGCTTTGATATGCAGCCAAAAGGGTCCTTGAAGGGCAAAACGAAGTGA 576 0.4931 MALGLEITELRLGLPGGGDDQNKSNEVTKKRVFLDIGRVDGGGGSGEDENSCAGDRKTPSKSAVVGWPPVGSYRRRNSMSEGSKEKIYVKVSMDGAPFLRKVDLGMQKGYSELVSALEKLFDCHGIGEALKGVDNSEVVPIYEDRDGDWMLVGDVPWEMFIESCKRLRIMKRSEAKGFDMQPKGSLKGKTK 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0414 191 Pfam AUX/IAA family 52 178 IPR033389 -
Lele38g0414 191 Gene3D - 80 183 - -
Lele38g0414 191 FunFam Auxin-responsive protein 81 182 - -
Lele38g0414 191 ProSiteProfiles PB1 domain profile. 86 174 IPR000270 GO:0005515
Lele38g0414 191 MobiDBLite consensus disorder prediction 38 61 - -
Lele38g0414 191 SUPERFAMILY CAD & PB1 domains 76 171 - -
Lele38g0414 191 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 176 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0414 Lele-ChrLele38 3329461 3331542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0414 81 187 B3 DNA Binding Superfamily AT4G23980 40.187 1.56e-14 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele38g0414 AUX_IAA 1.7e-45 CL0072