Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0405 ATGTTTGAGAGAACTGTGGGAATATCTATCTTCAAGATCTCACTTCATGTGTCTAGACCAAACACTGTCGTTTTGGGAAACATACCAGGAACACAGATATATCATAACCTAAACCAATACAAAGAAGCTTTAAGGATTCCTTCATTCCTCATTCTAGCTGTTGAGTCACCAATTTACTTTGCGAATTCAACTTACCTTCAAGAAAGAATACTGACATGGGTACGAGAAGAGGAAGAACGTGTGAAGGCAAACAAAGAAAGTACGTTGAAGTGCTTAATTGTAGACATGACAGCTGTTACAGCCATAGACACAAATGGGATTGACACACCATGTGAACTTAGAAAGATTCTGGAAAAAAGATCAATTCAGCTTGTCTCGGCAAATCCAGTTGCAAATGTGATGGAGAAGTTACATCAGTCAAAAGTTTTGGAATCTTTTGAATATAAAGGACTGTATCTCACTGTTGCAGAATTCTTGAGAAGCTCAGCCTCTTGTAACTCCATTGATGGCTTCTAA 516 0.3818 MFERTVGISIFKISLHVSRPNTVVLGNIPGTQIYHNLNQYKEALRIPSFLILAVESPIYFANSTYLQERILTWVREEEERVKANKESTLKCLIVDMTAVTAIDTNGIDTPCELRKILEKRSIQLVSANPVANVMEKLHQSKVLESFEYKGLYLTVAEFLRSSASCNSIDGF 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0405 171 SUPERFAMILY SpoIIaa-like 44 159 IPR036513 -
Lele38g0405 171 Pfam STAS domain 40 157 IPR002645 -
Lele38g0405 171 FunFam Sulfate transporter 31 19 165 - -
Lele38g0405 171 ProSiteProfiles STAS domain profile. 39 162 IPR002645 -
Lele38g0405 171 CDD STAS_SulP_like_sulfate_transporter 40 155 - -
Lele38g0405 171 PANTHER SULFATE TRANSPORTER 6 161 IPR001902 GO:0016020|GO:0055085
Lele38g0405 171 Gene3D STAS domain 19 161 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0405 Lele-ChrLele38 3251460 3253550 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0405 6 170 Inorganic Solute Cotransporters AT3G15990 61.818 3.75e-68 216