Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0401 ATGAGCGTGGTCGGTTTTGACTTTGGTAATGAGAGCTGTATTGTTGCTGTTGCAAGGCAGAGAGGGATTGATATCGTGCTCAATGATGAGTCCAAACGAGAAACTCCGGCAGTTGTGTGTTTTGGTGACAAACAACGGTTTATTGGAACAGCTGGGGCTGCATCTACCATGATGAACCCAAAGAATTCAATCTCACAGATCAAGCGACTAATTGGTAGACAATTCTCTGATCCCGAGTTGCAGCGGGATCTGAAGTCATTGCCTTTTATGGTAACTGAAGGGCCTGATGGCTATCCCTTAATTCATGCACGGTATTTGGGTGAAAATAAAACATTTACACCAACACAAGTGTTGGGAATGGTGTTCTCAGATCTCAAAGGCATAGCTGAGAAGAATCTGAATGCAGCTGTTGTTGATTGTTGCATTGGAATTCCGGTTTATTTCACTGATCTTCAGAGAAGGGCAGTATTGGATGCCGCTACAATTGCGGGTTTGCACCCACTTCGCCTGATTCATGAAACGACAGCAACTGCCTTGGCTTATGGAATTTATAAGACAGATCTCCCTGAAAATGATCAACTGAATGTAGCATTTGTGGATGTTGGACATGCCAGCATGCAAGTGTGCATTGCTGGTTTTAAGAAGGGGCAGTTGAAAGTATTGGCTCATTCATTTGATAGATCTCTAGGTGGTAGAGATTTCGATGAAGTTTTGTTCCATCACTTTGCTGCAAAGTTCAAGGAAGAGTACAAGATTGATGTTTTCCAGAATGCCAAGGCTTGTCTAAGGCTGAGAGCTGGTTGTGAGAAGCTGAAGAAGGTCCTCAGTGCAAATCCTGAAGCACCTCTCAACATTGAATGCTTAATGGACGAGAAAGATGTTAGGGGCTTCATCAAACGTGATGAATTCGAGCAATTAAGTGTTCCAATATTGGAACGAGTTAAAAAACCTTTGGAGAAGGCTCTTGCGGAAGGAGGTCTTATGGTTGAGAATGTACATATGGTTGAGGTAATTGGTTCAGCTTCTCGTATACCAGCTATATACAAGATATTGACAGATTTTTTCAAGAAGGAGCCTAGGCGGACAATGAATGCAAGTGAGTGTGTTGCCAAGGGCTGTGCCTTGCAATGTGCTATTCTTAGTCCAACATTTAAAGTACGAGAGTTTCAGGTCAATGAAAGCTTTCCTTTCCCAATTTCTCTGTCATGGAAAGGTTCTGGTCCAGATCTACAGGAGAGTGGACCTGAAAATCAGATGAGCACTGTTGTTTTCTCTAAAGGAAATGTCATACCAAGCATCAAGGCTCTGACATTCTATAGGTCGGAAACATTTTCTGTTGATGTACAGTATGCTGATGTGAGTGAGCTGCAGACACCTCCAAAGATCAGCACATATGCTATTGGTCCTTTGCCAACTACAAAAGTTGAGAAGGCAAAACTTAAAGTGAAAGTAAGATTGAATCTGCATGGAATTGTATCTATTGAGTCAGCAACTCTTCTGGAGGAGGAGGAAGTTGAAGTTCCGGTGGCCAAAGTACCAGCTGGAGAAAGTGCCAAGATGGACACTGACGAAGTTCCTGCTGAGGCTGCTGCAGCACCTTCAAGTTCTAATGATGCTGATGTTGAGATGCAAGATACTAAGGCAACTGTTGACGCCCCTGGGATGGAAAATGGCAACGCCGCTGAGACTGGGGATAAGCCTGTGCAGATGGATACTGATATCAAGGTTGAGGCTCCAAAGAAAAAGGTCAGGAAAACAAACATACATGTGACGGAGTTGGTATATGGAGCAATGAGTCGTTCAGATGTCCAGAAAGCTGTAGAGAAGGAGTTTGAAATGGCTTTGCAAGATCGAGTGATGGAAGAAACAAAAGAAAAGAAGAATGCTGTTGAGGCTTATGTTTATGACATGAGGAACAAGCTCAGCGACAAATACCATGAGTTTGTCACTGATTCAGAGAGAGAGGCACTTACTGCTAGACTTCAGGAGGTGGAAGACTGGTTATATGAAGATGGCGAGGATGAAACTAAAGGTGTTTATGTTGCCAAACTTGAGGAACTTAAGAAGCAAGGTGATCCAATTGAGGAGCGTTACAAGGAATACATGGAGAGGGGCACAGTAATCAATCAGTTCATCTATTGTATAAATAGCTACAGGGAAGCAGCAACGTCAAACGATCCCAAGTTTGATCACATTGACATTTCTGAGAAGCAGAAGGTCCTGAATGAATGTGTTGAAGCTGAGGCTTGGTTTAGGGAGAAGCAGCAGCAGCAGGACTCTCTTCCAAAACATGCCAACCCTGTACTCTTGTCGGCTGAAGTAAGAAAGAAAGCAGAGGCAGTCGATAGATTCTGTAAGCCAATTATGACAAAACCAAGGCCAGCCAAGCCGGCTACCCCTGAAGCGATACCAGCACCAACAGCAACACCACCGCCTCCTCAGGATGGTGAGCAGGAGCAACAACCTCAGGGAGATGATAATGCAGGCGACCACTCAGAGCAGGCGGCCCCACCAGCGTCTACTGAACCAATGGAGACTGATAAGTCAGAAAATTCAGGCGCTGCATAA 2568 0.4431 MSVVGFDFGNESCIVAVARQRGIDIVLNDESKRETPAVVCFGDKQRFIGTAGAASTMMNPKNSISQIKRLIGRQFSDPELQRDLKSLPFMVTEGPDGYPLIHARYLGENKTFTPTQVLGMVFSDLKGIAEKNLNAAVVDCCIGIPVYFTDLQRRAVLDAATIAGLHPLRLIHETTATALAYGIYKTDLPENDQLNVAFVDVGHASMQVCIAGFKKGQLKVLAHSFDRSLGGRDFDEVLFHHFAAKFKEEYKIDVFQNAKACLRLRAGCEKLKKVLSANPEAPLNIECLMDEKDVRGFIKRDEFEQLSVPILERVKKPLEKALAEGGLMVENVHMVEVIGSASRIPAIYKILTDFFKKEPRRTMNASECVAKGCALQCAILSPTFKVREFQVNESFPFPISLSWKGSGPDLQESGPENQMSTVVFSKGNVIPSIKALTFYRSETFSVDVQYADVSELQTPPKISTYAIGPLPTTKVEKAKLKVKVRLNLHGIVSIESATLLEEEEVEVPVAKVPAGESAKMDTDEVPAEAAAAPSSSNDADVEMQDTKATVDAPGMENGNAAETGDKPVQMDTDIKVEAPKKKVRKTNIHVTELVYGAMSRSDVQKAVEKEFEMALQDRVMEETKEKKNAVEAYVYDMRNKLSDKYHEFVTDSEREALTARLQEVEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKEYMERGTVINQFIYCINSYREAATSNDPKFDHIDISEKQKVLNECVEAEAWFREKQQQQDSLPKHANPVLLSAEVRKKAEAVDRFCKPIMTKPRPAKPATPEAIPAPTATPPPPQDGEQEQQPQGDDNAGDHSEQAAPPASTEPMETDKSENSGAA 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0401 855 CDD HSPA4_like_NDB 2 381 - -
Lele38g0401 855 Gene3D - 186 360 - -
Lele38g0401 855 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 709 796 IPR029048 -
Lele38g0401 855 Gene3D - 598 708 IPR029048 -
Lele38g0401 855 Gene3D - 5 374 - -
Lele38g0401 855 Coils Coil 684 704 - -
Lele38g0401 855 MobiDBLite consensus disorder prediction 785 855 - -
Lele38g0401 855 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 596 IPR029047 -
Lele38g0401 855 FunFam Heat shock 70 kDa protein 4 1 78 - -
Lele38g0401 855 PANTHER HSC70CB, ISOFORM G-RELATED 1 847 - -
Lele38g0401 855 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Lele38g0401 855 PRINTS 70kDa heat shock protein signature 2 15 - -
Lele38g0401 855 PRINTS 70kDa heat shock protein signature 332 348 - -
Lele38g0401 855 PRINTS 70kDa heat shock protein signature 30 42 - -
Lele38g0401 855 PRINTS 70kDa heat shock protein signature 363 383 - -
Lele38g0401 855 PRINTS 70kDa heat shock protein signature 140 160 - -
Lele38g0401 855 FunFam Heat shock 70 kDa protein 4 598 708 - -
Lele38g0401 855 MobiDBLite consensus disorder prediction 793 817 - -
Lele38g0401 855 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Lele38g0401 855 FunFam Heat shock 70 kDa protein 14 387 596 - -
Lele38g0401 855 Gene3D - 38 113 - -
Lele38g0401 855 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 631 IPR029047 -
Lele38g0401 855 FunFam Heat shock 70 kDa protein 4 230 313 - -
Lele38g0401 855 FunFam Heat shock 70 kDa protein 4 38 113 - -
Lele38g0401 855 FunFam Heat shock 70 kDa protein 4 107 213 - -
Lele38g0401 855 Gene3D Actin; Chain A, domain 4 230 313 - -
Lele38g0401 855 Pfam Hsp70 protein 3 546 IPR013126 GO:0005524|GO:0140662
Lele38g0401 855 Pfam Hsp70 protein 574 699 IPR013126 GO:0005524|GO:0140662
Lele38g0401 855 MobiDBLite consensus disorder prediction 516 542 - -
Lele38g0401 855 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 600 698 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0401 Lele-ChrLele38 3228249 3235983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0401 4 406 Calmodulin-binding Proteins AT1G16030 36.700 4.49e-84 280