Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0399 ATGTCCAAGAAGCTTCAAAACTTCGTTGGCCAGAAAATGAAAGTTCGAAAATTCTTTCAGTATTGTCTCTCTAAGCTTAAAAACCCTCGTCCCCAAATCCACCCTCGGTTTCCCCTAACCCGGATCCTCTTGGGTTGCAAGCAACCCAAGACCCATTCGATTGCAATTGTCAGGGGAAACAAAGCAGCTACGCTATCGGATATTGATCGCTTCCTCTTCGACAACTTCAAATCTATGTTCCTGCACGAAGAAGATACTACTATGAACTGTAGCATTACTAGCAGAGTTTGTGAAGAAAATCAGGGAGATCTGAGATCAGGATCCATTTCGTTCGACCGGACTTCGATGGATATTCTCGGTGACCTCAGCGAGACTTCCGGTTCTCGTGATAGCATCGTCGTATTGGTGTGCTCGGCGAGCCAGTATGAGGATCTCCGGCGATCTATGAAAGAAATGGTGGACCGGAGATTGAGAAAGTACGGGAGGGTGGATTGGGGATTTATGGAAGAGCTCTTGTTTTGTTATTTGAACCTGAATGAGAGGAAGTCATACAGGTTCATACTGAATGCTTACGTGGACTTGATCAACGGTCTACGCGAAAGATCGCCGGAAAGAGCTCCGGTGACAGCGAAGCCAAGGAGTGTTCGCACATTTAGGACTGGGAGCGAGATCAGGAGGAAGGAGAAGACCGAAGAAGATCCGGAAGAACTTAGGTACAAGGAACTATGTAGTGTTCTTTGGGTCGATGAAGACTTCATTCCCGACGGCAACGTCTTCGATTTGGGTGGTGGGGGAGTAATGGGAGATGATGGCTTGGACCTAGGCGTCGGTGAATGCTTGATTTACGGAGGCGGAGGATAG 861 0.4785 MSKKLQNFVGQKMKVRKFFQYCLSKLKNPRPQIHPRFPLTRILLGCKQPKTHSIAIVRGNKAATLSDIDRFLFDNFKSMFLHEEDTTMNCSITSRVCEENQGDLRSGSISFDRTSMDILGDLSETSGSRDSIVVLVCSASQYEDLRRSMKEMVDRRLRKYGRVDWGFMEELLFCYLNLNERKSYRFILNAYVDLINGLRERSPERAPVTAKPRSVRTFRTGSEIRRKEKTEEDPEELRYKELCSVLWVDEDFIPDGNVFDLGGGGVMGDDGLDLGVGECLIYGGGG 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0399 286 Pfam Transcriptional repressor, ovate 142 197 IPR006458 -
Lele38g0399 286 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 90 198 IPR038933 GO:0045892
Lele38g0399 286 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 133 199 IPR006458 -
Lele38g0399 286 ProSiteProfiles OVATE domain profile. 134 197 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0399 Lele-ChrLele38 3219666 3221036 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele38g0399 Ovate 5.6e-17 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0399 38 3219666 3221036 Lele38g0399 38 3219666 3221036 ECH
Lele38g0399 38 3219666 3221036 Lele39g1000 39 18780309 18781031 hybridization
Lele38g0399 38 3219666 3221036 Lele40g0378 40 3069169 3069909 hybridization