Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0382 ATGTCTTCGCCGTCTCAGGATCCGGAAACATATGAGCTTGACGAGTCTCCGGAAACATATGAGCCTGCCGAGTCTCCGGAAACATATGAGCCTGCCGAGTCTCCGGAAACATCTCAGCCTGCCGACTTCTGGTCTCCTCCTCCTCCTCCTTTTGTCGCCAACAGTGACACCTCCCCTTCAGCTCCGACTCATTCCATTTCACCTACTGCTACTCCGGCGGCGGTGGCGGAATCGAACGGAATGTCCCGGGCTACAGTAATTGGAATAGTTATCGGGACTGTATCTGGCTTGCTGCTTATGCTCGTTTGTGCGGGCGTTTGGGCTTATAAAAGGAGAAAGCGGAGGAGGACGAGAAACAATGGTTTGGAGGATTACTCTGCTGCTGCTCCTCCATCCCAACCCAAAGCTGTCGGCCGTGAGGTGATGGCGTACGGAATGAAACGGAGATTAACCGTTCTTTCTTTGAGTGCATTCGCATTTCCTGATCAGTTTGGTGGTCTGCCCCAGCAATGGCAACATAGCAATCCTCCTCCAACCGATGGTGAAGCAACACTGCCTCCCAAGCCAAGTCCACCCCACGGAGTTCTGTTGAACCAGCAGGCACCATCCCATAATGTCGCATCTCCTCTTCTGTATTCTACAATTGGCACGAGTTTGGAATCTGAGAAACCATACCATGCACCATCTCCTGCTATTACCTTGGGATTGTCACAAAGTGCGTTTACTTATGAAGAACTTGCATTTGCAACAAATGGATTCTCAGATTCAAACTTTCTTGGTCAAGGTGGGTTTGGCTATGTCCATAAAGGAGTCCTCCCAAATGAAAAAACTGTTGCAATTAAGCAGCTCAAATCTGGGAGCAGACAGGGGGAGCGTGAGTTCCAGGCTGAAGTGGAGGTCATTAGTCGAGTCCATCACAGACATCTTGTTTCCTTAGTTGGATACTGCACTGCTGGAGCCCAGAGGTTGCTTGTGTATGAGTTTGTCCCAAACAATACACTAGAATTCCATTTACATGGAAAAGATAGATCAACAATGGACTGGGTAACAAGGATAAAAATTGCCATTGGAGCTGCAAAGGGATTGTCATATCTGCACGAGGACTGTCACCCGAGAATCATACATCGTGATATCAAGGCATCTAACATTCTTCTTGATGACAATTTTGAGGCCAAGGTTGCAGATTTTGGACTTGCCAAATTTTCTTCAGATGCTGAAACGCATGTCTCCACTCGAGTAATGGGAACCTTTGGATACCTGGCTCCAGAATATGCTGCTAGTGGTAAACTCACTGAGAAGTCAGATATCTTCTCCTTTGGTGTTGTGCTTTTGGAGTTGATTACAGGGAGAAAACCTGTTGATAAAACCGAGTCTTTTAAATTTAAAGATGACAGTATGGTTGAGTGGGTGGGTACAGTACATTATCTATATTTCTCTCTTAAGAAACAGATTATTTATGGCACTAAGACATTGTGCAAATTACAGGCAAGACCTTTACTTTCTCAAGCTAAGGAAAATGGCAACTTCGATGCTCTTGCTGATCCAAGGTTGCAGAAGAGTTACGACTCTGATAAGATGCTTCGAATGGTTGCCTGTGCTGCAAATTGTGTGCGCCATTCAGCTAAACATCGGCCTCGAATGAGCCAGGTAGTTCGGGCTCTAGAAGGAAATATTTCTTTGGATGATCTGAATGAGGGGAGCACACCTGGGCACGGCAGAGCATTTAGTTCCTTTGAAAGTTCAGGTTATGATACCGGCCAATACAATGAGGACCTAAAGAAGTTCAGGAAGCTGGCACTAGAACGAGAAACTAGTGAGTACAGTGGGCCCAGTAGCGATTACGGTCAACATCAATCCACCTCAAGCAAGCCTAAGGTACTGTATGTGAACCGTAAGTTCAGTAATCAATATAAGGCTACCATTGGTGCTGATTTTCTCACCAAGGAAGTTCAATTTGAAGATAGGCTGTTCACATTGCAGATTTGGGATACTGCCGGTCAAGAGAGGTTTCAGAGTCTTGGTGTTGCTTTCTACCGTGGTGCAGACTGCTGTGTCCTTGTTTATGATGTAAATGTCATGAAATCTTTTGATAATCTCAATCACTGGCGTGAAGAATTTCTCATTCAGGCTAGTCCATCTGACCCAGAAAACTTCCCATTTGTTGTCTTGGGAAACAAAATAGATCTTGATGGTGGTAATAGCCGAGTTGTTTCTGAGAAGAAAGCCAAGGCATGGTGTGCTTCCAAGGGAAACATACCATACTTTGAGACCTCTGCAAAAGAAGGATTTAACGTAGAGGCTGCTTTCCAGTGTATAGCCAAAAATGCACTCAAGAATGAACCTGAAGAAGAAGTATCGAGAACTAGGGAATCAGCCATGGTTTCAGATTATGCAAATGCTCCTAATATGACTACAAAATCCATTTTGCCAAAAGTCTTACCAATCTATGGCATGGTGTTAACATGGGATCGTCTCAGGAAAATCAAAGGGTGTTTTCAACATCGAGCTCTGATCATGGAATCTGCCAAAGAACAAGATGCTGGCCTGCTGCACCAGATCCTACCACCACGCCTCGAAGATGCTGGCCTCGAAGAATGTGCTCTTCCACCGGAATCCATCAAAGAAGCCTTCTTCAAAGCCGCCTCCGCCGTGAAATCGCGAGCTACCTCCATTTTATCTGCTGATGACGAAGATGATGATGCAACTTGTGTTAAGGATCCTTGGCCCACCGCGAAGGATGCCTCCGATGTGGTAATTGGAATCAAGCCGGAGAACGAGCTAGATGGACCCTGCGCTGTCGATAAGGGGAGCGAAACCGGTGTGGACGAAGTTAAGATTGAGGGTGACAAGGATGATGAAGAGAAGGTTAAAGACAAGGTAATCGTGGGGGAAGAGGGAAAGAAATTGGGAGAGGAGGGGAAAGCTTGTGTGGATGGTTTGAAAGGATTGGATATTCAAGAAGATACGAAGACCAGTGATGACGTTGATGAGGAAGAGAAAGAGAAGGAAGGTAAAAGACCAACTCTGGTTGAAGGTTTTGTTTGA 3045 0.4581 MSSPSQDPETYELDESPETYEPAESPETYEPAESPETSQPADFWSPPPPPFVANSDTSPSAPTHSISPTATPAAVAESNGMSRATVIGIVIGTVSGLLLMLVCAGVWAYKRRKRRRTRNNGLEDYSAAAPPSQPKAVGREVMAYGMKRRLTVLSLSAFAFPDQFGGLPQQWQHSNPPPTDGEATLPPKPSPPHGVLLNQQAPSHNVASPLLYSTIGTSLESEKPYHAPSPAITLGLSQSAFTYEELAFATNGFSDSNFLGQGGFGYVHKGVLPNEKTVAIKQLKSGSRQGEREFQAEVEVISRVHHRHLVSLVGYCTAGAQRLLVYEFVPNNTLEFHLHGKDRSTMDWVTRIKIAIGAAKGLSYLHEDCHPRIIHRDIKASNILLDDNFEAKVADFGLAKFSSDAETHVSTRVMGTFGYLAPEYAASGKLTEKSDIFSFGVVLLELITGRKPVDKTESFKFKDDSMVEWVGTVHYLYFSLKKQIIYGTKTLCKLQARPLLSQAKENGNFDALADPRLQKSYDSDKMLRMVACAANCVRHSAKHRPRMSQVVRALEGNISLDDLNEGSTPGHGRAFSSFESSGYDTGQYNEDLKKFRKLALERETSEYSGPSSDYGQHQSTSSKPKVLYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNHWREEFLIQASPSDPENFPFVVLGNKIDLDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFQCIAKNALKNEPEEEVSRTRESAMVSDYANAPNMTTKSILPKVLPIYGMVLTWDRLRKIKGCFQHRALIMESAKEQDAGLLHQILPPRLEDAGLEECALPPESIKEAFFKAASAVKSRATSILSADDEDDDATCVKDPWPTAKDASDVVIGIKPENELDGPCAVDKGSETGVDEVKIEGDKDDEEKVKDKVIVGEEGKKLGEEGKACVDGLKGLDIQEDTKTSDDVDEEEKEKEGKRPTLVEGFV 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0382 1014 SUPERFAMILY Protein kinase-like (PK-like) 228 554 IPR011009 -
Lele38g0382 1014 FunFam Proline-rich receptor-like protein kinase PERK8 225 328 - -
Lele38g0382 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 373 385 IPR008271 GO:0004672|GO:0006468
Lele38g0382 1014 SMART ran_sub_2 611 813 - -
Lele38g0382 1014 MobiDBLite consensus disorder prediction 167 199 - -
Lele38g0382 1014 Gene3D Transferase(Phosphotransferase) domain 1 329 565 - -
Lele38g0382 1014 SMART serkin_6 253 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0382 1014 Pfam Protein tyrosine and serine/threonine kinase 258 461 IPR001245 GO:0004672|GO:0006468
Lele38g0382 1014 SMART ras_sub_4 625 779 - -
Lele38g0382 1014 SMART rab_sub_5 625 779 - -
Lele38g0382 1014 ProSiteProfiles small GTPase Ras family profile. 590 839 IPR001806 GO:0003924|GO:0005525
Lele38g0382 1014 Gene3D Phosphorylase Kinase; domain 1 216 328 - -
Lele38g0382 1014 MobiDBLite consensus disorder prediction 41 55 - -
Lele38g0382 1014 ProSiteProfiles Protein kinase domain profile. 253 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0382 1014 FunFam Ras-related protein Rab7 614 789 - -
Lele38g0382 1014 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 99 606 - -
Lele38g0382 1014 Pfam Ras family 627 777 IPR001806 GO:0003924|GO:0005525
Lele38g0382 1014 TIGRFAM small_GTP: small GTP-binding protein domain 630 772 IPR005225 GO:0005525
Lele38g0382 1014 ProSitePatterns Protein kinases ATP-binding region signature. 259 281 IPR017441 GO:0005524
Lele38g0382 1014 MobiDBLite consensus disorder prediction 1 71 - -
Lele38g0382 1014 PRINTS Transforming protein P21 ras signature 716 729 - -
Lele38g0382 1014 PRINTS Transforming protein P21 ras signature 632 648 - -
Lele38g0382 1014 PRINTS Transforming protein P21 ras signature 650 672 - -
Lele38g0382 1014 PRINTS Transforming protein P21 ras signature 754 776 - -
Lele38g0382 1014 MobiDBLite consensus disorder prediction 980 1014 - -
Lele38g0382 1014 MobiDBLite consensus disorder prediction 56 71 - -
Lele38g0382 1014 Gene3D - 625 792 IPR027417 -
Lele38g0382 1014 MobiDBLite consensus disorder prediction 980 1008 - -
Lele38g0382 1014 CDD Rab7 628 782 - -
Lele38g0382 1014 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 628 794 IPR027417 -
Lele38g0382 1014 SMART rho_sub_3 626 779 IPR001806 GO:0003924|GO:0005525
Lele38g0382 1014 ProSiteProfiles small GTPase Rab1 family profile. 589 829 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0382 Lele-ChrLele38 3095770 3110151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0382 227 614 Trihelix Transcription Factor Family AT1G70460 57.841 1.38e-143 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lele38g0382 PK_Tyr_Ser-Thr 1.7e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0382 38 3095770 3110151 Lele39g1025 39 18932964 18937095 hybridization
Lele38g0382 38 3095770 3110151 Lele40g0358 40 2941991 2947269 hybridization