Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0375 ATGTCCAATAACCCACCTCCATCTTCTCACACTAAAGACTTCTTCGCTTCTCCGGCTCTTTCTCTCAGCCTCGCTGGGATTTTCCGTCATGCCGGAGAAGCAGCTGCGGCGGCAGGAGCCGCCACGTCCAGCAGGGAGGTGGAGGAAGGGGATGAAGTGAGCGGCGGCGGTGGCCGGCGAGACGAAACAGTGGAGATTAGCAGCGAGAACTCCGGCCACACGAGATCCAGATCGGAAGATATTGATTTTGAAGGAGAAGGAGAGCATGACGACGACGGTGGCGACGGTGACGGAGATAAGAACAAGAAGAAGAAAAGGAAGAAGTATCACAGGCACACAGCTGAACAAATCAGGGAAATGGAAGCGCTTTTCAAAGAGTCACCACATCCAGATGAAAAGCAAAGGCAACAACTTAGCAAGCACTTAGGCCTTGCTCCTAGGCAAGTCAAGTTCTGGTTCCAGAATCGTCGAACCCAAATCAAGGCAATACAAGAACGTCATGAGAATTCTTTGTTAAAGACAGAAATCGACAAGCTGAGAGACGAAAACAAGCAAATGAGAGACACAACCAACAAAGCATGCTGCCCCAACTGTGGCATCGCCACCACCAGCAGAGACACCGTCTTGTCCGCCGAAGAACAACAACTTCGTATCGAAAATGCCAAACTCAAAGCCGAGGTAGAGAAGTTGAGAAGCGTAATAGGGAAGTACCCACAAGGGACGGCGTCACCGTCATGTTCAGGAGGGAACGGCGAGCAAGAGAACAGGAGCTCATTGGATTTCTACAGCGGAATATTTGGGCTTGACAAGTCGAGAATAATGGAGACTGTGAATCAAGCTTTGGAGGAGCTCGTGAAAATGGCGACAGTGGGAGAACCATTGTGGGTTCGGAGTTTAGAGACTGATCGTGAAATACTGAACTATGATGATTATGTGAAGGAGTTCGGAGCGAAATCTGAAAGTTCAAGCCACCATGGAAGACCAAAAAGATCCATCGAAGCTTCCAGAGAAACTCGGGTTGTTTTTGTTGATCTCCCTCGCCTACTTCACAGATTCTTAGATGTGAATCAATGGAAGGAGATGTTTCCATGCTTGATATCAAAAGCAGCAACTGTAGATGTGATTTGCAGTGGAGAAGGAGCTAACAGGAATGGTGCGGTTCATCTGATGTTTGCTGAGCTACAAATGTTAACGCCAATGGTGGCCACAAGAGAAGTGTATTTCGTGAGGTACTGTAAGCAACTCAGTGCAGAGCAGTGGGCTATAGTGGACGTGTCAGTGGACAAGGTTGAAGACAACATCGATGCCTCTCTTGTGAAATGTCGAAAACGCCCCTCTGGTTGCATTATTGAAGATAAGTCTAATGGCCATTGCAAGGTAACATGGGTGGAGCACTTGGAATGCCAGAAGAGCACAGTGCACACAATGTACCGCACCATTGTAAACAGTGGCATGGCTTTTGGTGCAAGGCACTGGGTTGCCACCCTCCAACTTCAATGTGAACGTCTCGTTTTCTTCATGGCCACCAATGTTCCCACCAAGGATTCAGCTGGTGTTGCAACGTTAGCAGGAAGGAAGAGCATATTGAAGCTAGCACAGAGGATGACATGTAATTTCTGCCATGCCATTGGAGCTTCGAGCTTCCATACATGGACTAAGGTCACCAGCAAAACAGGGGAAGACATCAGAATAAGTTCTAGGAAGAATTTGAATGATCCTGGGGAACCTCTAGGGGTGATCTTGTGTGCAGTTTCTTCTATGTGGCTCCCAGTTTCTCCTAATGTTCTCTTCGATTTCTTGAGGGATGAAGCTCGCAGATCTGAGTGGGATATCATGTCCAATGGTGCTTCAGTGCAATCCATCGCAAACTTAGCCAAAGGACAAGACCGAGGCAATTCAGTGACCATCCAAACAATAAAATCAAAAGAGAATAGCATGTGGGTACTACAAGATAGCTGCACAAATGCATATGAATCAATGGTGGTGTATGCTCCAGTTGACATAAGTGGGATTCAGTCTGTGATGACAGGATGTGACTCTAGCAATCTAGCCATACTTCCCTCAGGCTTCTCAATTCTACCTGATGGGTTGGAAGCAAGACCTTTGGTCATAACTTCAAGGGAAGAAGAGAGAAACACAGAAGGGGGTTCTTTGCTCACAGTCGCTTTTCAGGCACTTACTAATACATCTCCTACAGCTAAGCTAACAATGGAGTCTGTGGAATCTGTCAACACTCTTATATCTTGTACATCAAGAAATATCAGAACCAGTTTACAATGTGAAGATGGTTGA 2292 0.469 MSNNPPPSSHTKDFFASPALSLSLAGIFRHAGEAAAAAGAATSSREVEEGDEVSGGGGRRDETVEISSENSGHTRSRSEDIDFEGEGEHDDDGGDGDGDKNKKKKRKKYHRHTAEQIREMEALFKESPHPDEKQRQQLSKHLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKTEIDKLRDENKQMRDTTNKACCPNCGIATTSRDTVLSAEEQQLRIENAKLKAEVEKLRSVIGKYPQGTASPSCSGGNGEQENRSSLDFYSGIFGLDKSRIMETVNQALEELVKMATVGEPLWVRSLETDREILNYDDYVKEFGAKSESSSHHGRPKRSIEASRETRVVFVDLPRLLHRFLDVNQWKEMFPCLISKAATVDVICSGEGANRNGAVHLMFAELQMLTPMVATREVYFVRYCKQLSAEQWAIVDVSVDKVEDNIDASLVKCRKRPSGCIIEDKSNGHCKVTWVEHLECQKSTVHTMYRTIVNSGMAFGARHWVATLQLQCERLVFFMATNVPTKDSAGVATLAGRKSILKLAQRMTCNFCHAIGASSFHTWTKVTSKTGEDIRISSRKNLNDPGEPLGVILCAVSSMWLPVSPNVLFDFLRDEARRSEWDIMSNGASVQSIANLAKGQDRGNSVTIQTIKSKENSMWVLQDSCTNAYESMVVYAPVDISGIQSVMTGCDSSNLAILPSGFSILPDGLEARPLVITSREEERNTEGGSLLTVAFQALTNTSPTAKLTMESVESVNTLISCTSRNIRTSLQCEDG 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0375 763 SMART HOX_1 105 167 IPR001356 GO:0003677
Lele38g0375 763 FunFam Homeobox-leucine zipper protein GLABRA 2 275 501 - -
Lele38g0375 763 CDD START_ArGLABRA2_like 270 501 - -
Lele38g0375 763 MobiDBLite consensus disorder prediction 32 115 - -
Lele38g0375 763 ProSiteProfiles START domain profile. 266 505 IPR002913 GO:0008289
Lele38g0375 763 Coils Coil 162 192 - -
Lele38g0375 763 ProSitePatterns 'Homeobox' domain signature. 138 161 IPR017970 GO:0000981|GO:0006355
Lele38g0375 763 Pfam START domain 278 502 IPR002913 GO:0008289
Lele38g0375 763 Gene3D - 319 499 IPR023393 -
Lele38g0375 763 MobiDBLite consensus disorder prediction 45 83 - -
Lele38g0375 763 CDD homeodomain 110 161 IPR001356 GO:0003677
Lele38g0375 763 Pfam Homeodomain 106 161 IPR001356 GO:0003677
Lele38g0375 763 SMART START_1 275 502 IPR002913 GO:0008289
Lele38g0375 763 Gene3D - 94 175 - -
Lele38g0375 763 SUPERFAMILY Homeodomain-like 96 164 IPR009057 -
Lele38g0375 763 SUPERFAMILY Bet v1-like 268 502 - -
Lele38g0375 763 ProSiteProfiles 'Homeobox' domain profile. 103 163 IPR001356 GO:0003677
Lele38g0375 763 FunFam Homeobox-leucine zipper protein HDG1 92 179 - -
Lele38g0375 763 Coils Coil 211 233 - -
Lele38g0375 763 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 104 758 IPR042160 -
Lele38g0375 763 SUPERFAMILY Bet v1-like 532 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0375 Lele-ChrLele38 3057558 3066199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0375 66 762 Homeobox Transcription Factor Family AT1G79840 65.488 0.0 928
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele38g0375 START 4.7e-56 CL0209