Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0370 ATGGGTGCATCATTTAAGGCTTTGAGCCAACACTTCCGACTCCTCCTTTTCCATAAACGTTCCCTTATTTCAGCTTCTTGTGATTCATTAGCTTCCTCTTCTCTCACTCTCTCATCGCATCCTTCATACCCCAGGTTTTGTTTCTCGCAGTTTCGGTTATATTCATCATCACCTTCTGAATTCATGGAGATGGTCACAGAATTTGCTAAACATGGGCTTGCAGCTCATGACAGTGTTGCCATTAGAGCAGATCAAAAGAGTTACAGTTACAAGCAGCTCATATCTTCTGCGCAGGAGATATCAAATCTCTTATGTGGAAATGACATGAAATCAGGAAATGTTGGTGGAGCTAGAATAGGAATTGTAGCCAAACCCTCTGCGGAGTTTGTTGCTGCAATGCTAGGGACTTGGCTTAGTGGAGGCGTTGCTGTGCCGCTTGCACTGAGCTATCCAGAAACAGAGCTATTGTATGTGATGAATAATGCTGACGTGTCTGCGATATTGAGTACTGAAGATCATAGTGAAACAATGCAAAATGTTGCCAACAAAAGCACTTCTCAGTTTTTTCTTATTCCTCCTGTTCCCAATAAATCCTCGGAGAAGAGCAGAGATGAAGATTCACAAAGTAGAGAAGTGCTGGCAGAAAGAATTCATCAGGGGAATATCAAAAGAACAAGTGAAGATCCAGCATTGATATTGTACACTAGTGGGACAACAGGTAAACCTAAGGGAGCCGTTCACACGCATCGAAGTATCAGTGCACAGGTTCAAACCTTGACAAAAGCGTGGGAGTACACATCTGCTGATCAATTTCTGCACTGTCTACCTCTCCATCATATCCATGAAAAATTTTATGTTTATTTTGACAGAAATTCATTTGATTTGATTAAGCATATTGTCATCTTTGGTTTGTTTGTTGGATATTTTACTATTATTATTTCAATCCTTAACTTATACTATACATGTTCATGGACTTTTCAATGCTTTGCTGGCCCCACTTTATGCTGGTTCCACGAATCTAATGTCTTCATGAAGGTTGACTTTATGCCCAAATTTAGCGTGAGCGGAATTTGGCAGAGATGGCGTGAGTCCTATCCAGTTGAAGGAACTAAGGCTGAGGACGCTATAACTGTGTTCACCGGAGTTCCAACTATTTATACCAGATTGATACAAGGTTACCAAGCAATGGACCCTGAGTCCCAAGCCGCTTCAGCTGCTGCTGCAAGGAACTTGCGTCTTATGATGTGTGGGTCCTCTGCACTTCCTCAACCGGTTATGCAAGAATGGGAAGCCATAACTGGGCATCGGCTGTTGGAGCGATATGGCATGACTGAATTTGTCATGGCAATATCAAATCCCTTGAAAGGTGAGCGGAAGGCAGGCACTGTTGGAAAACCTTTTCCTGGTGTGCAGGTTAAGATTCTTGCAGATGAGGAGAGTGGAAGTAATGTAAATAAAGTGGGCGAGCTTTGCATTAAAAGCCCATCGTTGTTTAAAGAATATTGGAAACTTCCTGAGGTAACAAAGGAATCATTCATTGATGATGGCTTCTTCAAAACTGGAGATGCAGTCACTATGGATGAAGATGGATATTACATCATCTTAGGACGTACCAATGCCGATATAATGAAGGTCGGTGGCTACAAACTATCTGCACTAGAAATTGAATCAGTTCTATTAGAGAACCCAGCTGTGTCAGAATGTTGCGTGTTGGGCTTACCGGACAAAGATTACGGAGAAGTAGTTTGTGCAATTATTGTCGCAGAGGCTGAGACTAAGGAAAAGAGAGAGGAAGAGTCAAAACCTGCTTTATCCTTAGAAGAATTGTCATCTTGGGCCAAAGACAGACTTGCACCTTACAAGGTATTCCTTCGTCATCTGTCTCTGTTCTTTCCATTTATGTATAGAATATGTCAATTTTCACTGACACCAATTCATTTGATGCTTATATTCCTATGTTGCCAGATACCCACTCGATTGTTCCTTTGGGACTCTCTTCCTCGTAATGCAATGGGGAAGGTGAACAAGAAAGAGTTGAAGAAATTGCTGGCTCCGGAGCAGTAA 2064 0.4201 MGASFKALSQHFRLLLFHKRSLISASCDSLASSSLTLSSHPSYPRFCFSQFRLYSSSPSEFMEMVTEFAKHGLAAHDSVAIRADQKSYSYKQLISSAQEISNLLCGNDMKSGNVGGARIGIVAKPSAEFVAAMLGTWLSGGVAVPLALSYPETELLYVMNNADVSAILSTEDHSETMQNVANKSTSQFFLIPPVPNKSSEKSRDEDSQSREVLAERIHQGNIKRTSEDPALILYTSGTTGKPKGAVHTHRSISAQVQTLTKAWEYTSADQFLHCLPLHHIHEKFYVYFDRNSFDLIKHIVIFGLFVGYFTIIISILNLYYTCSWTFQCFAGPTLCWFHESNVFMKVDFMPKFSVSGIWQRWRESYPVEGTKAEDAITVFTGVPTIYTRLIQGYQAMDPESQAASAAAARNLRLMMCGSSALPQPVMQEWEAITGHRLLERYGMTEFVMAISNPLKGERKAGTVGKPFPGVQVKILADEESGSNVNKVGELCIKSPSLFKEYWKLPEVTKESFIDDGFFKTGDAVTMDEDGYYIILGRTNADIMKVGGYKLSALEIESVLLENPAVSECCVLGLPDKDYGEVVCAIIVAEAETKEKREEESKPALSLEELSSWAKDRLAPYKVFLRHLSLFFPFMYRICQFSLTPIHLMLIFLCCQIPTRLFLWDSLPRNAMGKVNKKELKKLLAPEQ 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0370 687 Pfam AMP-binding enzyme C-terminal domain 554 623 IPR025110 -
Lele38g0370 687 Gene3D - 310 537 IPR042099 -
Lele38g0370 687 PANTHER ACYL-COA SYNTHETASE 40 681 - -
Lele38g0370 687 ProSitePatterns Putative AMP-binding domain signature. 232 243 IPR020845 -
Lele38g0370 687 SUPERFAMILY Acetyl-CoA synthetase-like 373 623 - -
Lele38g0370 687 Pfam AMP-binding enzyme 76 283 IPR000873 -
Lele38g0370 687 Pfam AMP-binding enzyme 375 544 IPR000873 -
Lele38g0370 687 Gene3D - 63 288 IPR042099 -
Lele38g0370 687 SUPERFAMILY Acetyl-CoA synthetase-like 54 285 - -
Lele38g0370 687 CDD MCS 77 681 - -
Lele38g0370 687 Gene3D - 541 687 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0370 Lele-ChrLele38 2997987 3004407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0370 227 683 Monolignol Biosynthesis Gene Families AT4G19010 23.769 1.48e-28 119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0370 38 2997987 3004407 Lele38g0370 38 2997987 3004407 ECH
Lele38g0370 38 2997987 3004407 Lele39g1037 39 19031936 19043467 hybridization
Lele38g0370 38 2997987 3004407 Lele40g0346 40 2853727 2857466 hybridization