Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0367 ATGAGGGTAATGACAGGAAGTAGTAGAAGTGGAAGGGAAGGCGATAGGGCACAATGGAAGGATGACGTCAGTGAGGGTGGAGGAGTTCTCGCCATAGAGGTTTCTGCTCTGGAACCCACCGCCGACAATGGCACAGACAAGCACGCAACAAGGCCGCTGCCGCCTTGCGCGGTGGTGGTTATGGGTCTCCCTTTAGGCTGCTCTGTTCTCGATCTCAAATCCCGATTCGAGATTTACGGTGCCATCTCCCGCATACACATCGACCGTGACAGAGGTGGCTACACCTATCGGACCAAGGAATCTGCCGATGCCGCTATAGCTGTTGCGCTCGACCCATCTTTGTCATCATTGTCAGTCCGAAAAGATTACTTCATGCTCCTTTCCATGCTCGGTTCTTAA 399 0.5313 MRVMTGSSRSGREGDRAQWKDDVSEGGGVLAIEVSALEPTADNGTDKHATRPLPPCAVVVMGLPLGCSVLDLKSRFEIYGAISRIHIDRDRGGYTYRTKESADAAIAVALDPSLSSLSVRKDYFMLLSMLGS 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0367 132 MobiDBLite consensus disorder prediction 1 24 - -
Lele38g0367 132 CDD RRM_SF 58 107 - -
Lele38g0367 132 SUPERFAMILY RNA-binding domain, RBD 30 107 IPR035979 GO:0003676
Lele38g0367 132 Gene3D - 5 112 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0367 Lele-ChrLele38 2984230 2985475 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0367 42 114 Homeobox Transcription Factor Family AT1G27050 62.162 1.05e-19 79.0