Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0363 ATGGGTGGGAACCCTAACTTGTGGAACAATATGCATGACGCTGCTTATTTTGTTGGATCTTCCATTGCTTTCAATTCGCTGATCCCTCAAAACTCTGATCAGCCTCCTCCTTCCACCTGGAGCCAACTCCTCTTCTCAGGAGCACCAGGAGAAGAACAGAGATTGAGTTATGATCATTTTCAAGCAAAGAAATTGGGAACGTGGGAAGAACAGGTTCTGAATAATCCATCCTTGTCCAGAGTTCATCTTGTAGAAGGATTAATAAAGCAAGAGGCTTGCTTGTACGGCCATGGTGGTGGTGGTGAGGAATTTCAGGGTCCTTCTTCTTCAGCAGCTAATTGGTCACACATGGTGGTTCCTGCTGTTTCTTCTCCCCCTAGGTTGTCTTGCATCACTAGCTTCACTAGTAGTCATAATATTAACAACAACGACGACGACGACACTGTATTGGATTCTTTCTCTTATAACGAGGCTCCTCACACGGAGAAAACTCATCTTCCTCCTGCTGCAGATCACTCATCTGAGTACTGTAGCACATCCCCTGGTGGAATCTGCAAGAAGGCTAGGGTTCAAGCATCTTCAAGCCAGACTCCTCTCAAGGTGAGGAAGGAGAAGTTAGGAGATAGAATATCTGCCCTTCACCAACTAGTTTCTCCTTTTGGAAAGACCGACACAGCTTCAGTGGTGTTAGAAGCCACTGGATATATCAGATTCCTTCATGGTCAAATTGAGGCTCTCTGTTTTCCTTATTTCGGAAATTCATCAAAAAACTTGAGGAATCATTGCTTTGTGAATCATGGAGAGAGGAATTCTGTATTCCCAGAGGACCCTGGACAGCTGTTGAATAGTGACTCTTCCCTCAAAAGAAATGGAGCTCCAAACCAGGAAAATGGAGAAGAAAAGGCAAAGGACTTGAGAAGCAAGGGGTTATGCTTGGTGCCCATGTCTTTGAGCCATCATTTTGGGAGTGATCCTAATAATATTGGAGCTGAGTTTTGGTCATCCCCTTACGCCGCCGGCTTTTAA 1026 0.4493 MGGNPNLWNNMHDAAYFVGSSIAFNSLIPQNSDQPPPSTWSQLLFSGAPGEEQRLSYDHFQAKKLGTWEEQVLNNPSLSRVHLVEGLIKQEACLYGHGGGGEEFQGPSSSAANWSHMVVPAVSSPPRLSCITSFTSSHNINNNDDDDTVLDSFSYNEAPHTEKTHLPPAADHSSEYCSTSPGGICKKARVQASSSQTPLKVRKEKLGDRISALHQLVSPFGKTDTASVVLEATGYIRFLHGQIEALCFPYFGNSSKNLRNHCFVNHGERNSVFPEDPGQLLNSDSSLKRNGAPNQENGEEKAKDLRSKGLCLVPMSLSHHFGSDPNNIGAEFWSSPYAAGF 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0363 341 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 55 319 - -
Lele38g0363 341 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 190 239 IPR011598 GO:0046983
Lele38g0363 341 MobiDBLite consensus disorder prediction 276 293 - -
Lele38g0363 341 CDD bHLH_AtbHLH_like 200 246 IPR045239 -
Lele38g0363 341 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 200 250 IPR036638 GO:0046983
Lele38g0363 341 MobiDBLite consensus disorder prediction 274 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0363 Lele-ChrLele38 2960094 2964568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0363 32 280 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 43.382 1.24e-39 141
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0363 38 2960094 2964568 Lele38g0363 38 2960094 2964568 ECH
Lele38g0363 38 2960094 2964568 Lele39g1043 39 19072886 19076026 hybridization